BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10329 (UTR included)
(1939 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_896_C1 2198 0.0
>BF14_896_C1
Length = 1209
Score = 2198 bits (1109), Expect = 0.0
Identities = 1180/1200 (98%), Gaps = 4/1200 (0%)
Strand = Plus / Plus
Query: 369 gacggaacgtatttatgaaactgatatctcgtactgtgttttgagatttgttattgtaca 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 gacggaacgtatttatgaaactgatatctcgtactgtgttttgagatttgttattgtaca 71
Query: 429 tatgtcctcagaattattaacattatatattaatctcttttaaagtagaactgttatgag 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 tatgtcctcagaattattaacattatatattaatctcttttaaagtagaactgttatgag 131
Query: 489 ttattgaatacaatgagtacagttccagaaaacgcaccaaatcattgccctggtactggg 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 ttattgaatacaatgagtacagttccagaaaacgcaccaaatcattgccctggtactggg 191
Query: 549 agtgaagatgcagggaaagcctcagcttgtgccggctgccctaaccagaatatatgtgct 608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 agtgaagatgcagggaaagcctcagcttgtgccggctgccctaaccagaatatatgtgct 251
Query: 609 tctggtgtggcaactggtcctgatccagcaattgaattgataaaaagtcgcctatcgaat 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 tctggtgtggcaactggtcctgatccagcaattgaattgataaaaagtcgcctatcgaat 311
Query: 669 gtcaaacataaaattttggttctctccggcaaagggggtgtcggaaaaagtactgtcaca 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 gtcaaacataaaattttggttctctccggcaaagggggtgtcggaaaaagtactgtcaca 371
Query: 729 tcattgctaggacacatgttggcaaaacaaaaccctaatatgaatgtggggatcttagac 788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tcattgctaggacacatgttggcaaaacaaaaccctaatatgaatgtggggatcttagac 431
Query: 789 gcggacatttgtggtcccagccagccccgtgtgctgggcgtccgtggagagctcgtacac 848
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 432 gcggacatttgtggtcccagccagccccgtgtgctgggcgtccgcggagagctcgtacac 491
Query: 849 aactcgggctccggctggtcgcccgtctatgtaacggacaacctctccctgatgtccatc 908
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 492 aactcgggctccggctggtcgcccgtctatgtaacggacaacctttccctgatgtccatc 551
Query: 909 ggcttctacgacccgtcgggcctactg-cgcg-tgatatggaggggacccaagaagaacg 966
|||||| | | | | | || || |||| |||||||||||||||||||||||||||
Sbjct: 552 ggcttc--ctgctaggcagcccggatgacgcggtgatatggaggggacccaagaagaacg 609
Query: 967 gtatgatcaaacagttcctgagtgaagtggactggggagaccttgattacctgctcatcg 1026
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 gtatgatcaaacagttcctgagtgaagtggactggggagaccttgattacctgctcatcg 669
Query: 1027 acactccgccgggtacgtctgacgagcacctgtccctggtgcagtacctggccgagggag 1086
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 acactccgccgggtacgtctgacgagcacctgtccctggtgcagtacctggccgagggag 729
Query: 1087 ctcgctgtgtggtggtgagcacgccgcaggagctggccttgctggacgtacgaaaggagc 1146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 ctcgctgtgtggtggtgagcacgccgcaggagctggccttgctggacgtacgaaaggagc 789
Query: 1147 tggccttctgtcggaaagtgggactgccggtgctgggggtagtggagaatatggctctgt 1206
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 790 tggccttctgtcggaaagtgggactgcctgtgctgggggtagtggagaatatggctctgt 849
Query: 1207 tcgtctgccccaactgtcaggcgcagagtgagatcttccccgcgtcgacgggtggctcga 1266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 850 tcgtctgccccaactgtcaggcgcagagtgagatcttccccgcgtcgacgggtggctcga 909
Query: 1267 gtcagatgtgctcggagctgggcgtgccgctgctgggcgctctgcccttggagccgcttt 1326
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 910 gtcagatgtgctcggagctgggcgtgccgctgctgggcgctctgcccttggagccgcttc 969
Query: 1327 tggcgcgcgccgccgaccgcggcgaggacttcatagcagcccgacccacctcgcccgctg 1386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 970 tggcgcgcgccgccgaccgcggcgaggacttcatagcagcccgacccacctcgcccgctg 1029
Query: 1387 tcacggcactcacggatatagtcaagaaaatcacggcgtcctgtgaatcttaaatagtaa 1446
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1030 tcacggcactcacggatatagtcaagaaaatcacggcgtcctgtgaatcttaaatattaa 1089
Query: 1447 atgacacaagtgtttttgttatttacatattatagttttaagtgtatcgagccgacacct 1506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1090 atgacacaagtgtttttgttatttacatattatagttttaagtgtatcgagccgacacct 1149
Query: 1507 agtctgtgttaaatgtaaagataaaaatcaaatatattatatagaataaatatatattca 1566
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1150 agtctgtgttaaatgtaaagataaaaatcaaatatattatataaaataaatatatattca 1209
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 301,510
Number of extensions: 8255
Number of successful extensions: 8255
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8253
Number of HSP's successfully gapped: 2
Length of query: 1939
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1922
Effective length of database: 8,119,229
Effective search space: 15605158138
Effective search space used: 15605158138
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)