BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10331 (UTR included)
(2902 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3218_C1 1675 0.0
BF01039A1G07 172 2e-42
>BF14_3218_C1
Length = 875
Score = 1675 bits (845), Expect = 0.0
Identities = 866/874 (99%)
Strand = Plus / Plus
Query: 1235 taaaaagaactctgtgcccagaaaagacaccaagactaaagacagaagagagcgtgaaat 1294
|||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2 taaaaagaactccgcgcccagaaaagacaccaagactaaagacaggagagagcgtgaaat 61
Query: 1295 tttcacgccgcctagaaataaatccacggactctttaaaaataagaaaaaaatctgatag 1354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tttcacgccgcctagaaataaatccacggactctttaaaaataagaaaaaaatctgatag 121
Query: 1355 atattccaaaagcccacctgtaaataaaaagtctgaacgatctccacaaaaaaaatcaag 1414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 atattccaaaagcccacctgtaaataaaaagtctgaacgatctccacaaaaaaaatcaag 181
Query: 1415 ttccaaaacaaaagttcaacagaaaaaatcgagagacagctccgtgactccccctcggag 1474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ttccaaaacaaaagttcaacagaaaaaatcgagagacagctccgtgactccccctcggag 241
Query: 1475 ttatgcaagagaagctactcctagttcgagatcgcattccgaatctctaacaccaagtag 1534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ttatgcaagagaagctactcctagttcgagatcgcattccgaatctctaacaccaagtag 301
Query: 1535 caaaagaaagcgatctctcacaccgaaatcatttcccagcagatcttcctcaagccattc 1594
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 302 caaaagaaagcgatctctcacaccgaaatcatctcccagcagatcttcctcaagccattc 361
Query: 1595 gtctgattcttctgttaggtcacgttcaaaacgtcgtacgagacgtaaatccaaacccgg 1654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gtctgattcttctgttaggtcacgttcaaaacgtcgtacgagacgtaaatccaaacccgg 421
Query: 1655 ctcaagaagtcgctgcgggtcacgggaacgatctctaagtaaaaaaagatcccactctcg 1714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ctcaagaagtcgctgcgggtcacgggaacgatctctaagtaaaaaaagatcccactctcg 481
Query: 1715 cggtcggtctagttctcggtataggtcgagaagatcaagaagttctaagacgtctaagtc 1774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 cggtcggtctagttctcggtataggtcgagaagatcaagaagttctaagacgtctaagtc 541
Query: 1775 tagatccagatctcggagctcccggtcgcgcagtcgcaatcgtagtcgtagtcgcagtgg 1834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tagatccagatctcggagctcccggtcgcgcagtcgcaatcgtagtcgtagtcgcagtgg 601
Query: 1835 cactgcaagtgaagatgaacgcaggggtcaatttacagtggcagacagaaaaaggttttg 1894
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 cactgcaagtgaagatgaacgcaggggtcaatttacagtggcagacagaaaaaggttttg 661
Query: 1895 gaaaatgcacagaagtagacaaatggagcggctgaaatctccacctaaggatgtaagacc 1954
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 662 gaaaatgcacagaagtagacaaatggagcggctgaaatctccacctaaggaagtaagacc 721
Query: 1955 gccgcccggtgcggtcgaatctacggcactggacgatatcgagtatggagtcccaccgga 2014
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 gccgcccggtgcggtcgaatctacggcactggacgatatcgagtatggagtcccaccgga 781
Query: 2015 agtggaaggcccgaatttcgctgaacttttaccaacaccagaacaagtaatgcaattacc 2074
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 782 agtggaaggcccgaatttcgctgaacttttaccaacaccagnnnaagtaatgcaattacc 841
Query: 2075 gtcagcctcgaagtccaaaccagtaccgatacca 2108
||||||||||||||||||||||||||||||||||
Sbjct: 842 gtcagcctcgaagtccaaaccagtaccgatacca 875
>BF01039A1G07
Length = 762
Score = 172 bits (87), Expect = 2e-42
Identities = 87/87 (100%)
Strand = Plus / Plus
Query: 2570 agtaaaatgcctgaaatgatcaaatcacccagcgacatcaaaactgcaccttttgatccg 2629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20 agtaaaatgcctgaaatgatcaaatcacccagcgacatcaaaactgcaccttttgatccg 79
Query: 2630 cgcttcccaaaccagaatcagacaagg 2656
|||||||||||||||||||||||||||
Sbjct: 80 cgcttcccaaaccagaatcagacaagg 106
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 326,555
Number of extensions: 6422
Number of successful extensions: 6422
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6422
Number of HSP's successfully gapped: 2
Length of query: 2902
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2884
Effective length of database: 8,109,745
Effective search space: 23388504580
Effective search space used: 23388504580
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)