BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10332 (UTR included)
(1249 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01039A1G07 1449 0.0
>BF01039A1G07
Length = 762
Score = 1449 bits (731), Expect = 0.0
Identities = 740/743 (99%)
Strand = Plus / Plus
Query: 495 agtaaaatgcctgaaatgatcaaatcacccagcgacatcaaaactgcaccttttgatccg 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20 agtaaaatgcctgaaatgatcaaatcacccagcgacatcaaaactgcaccttttgatccg 79
Query: 555 cgcttcccaaaccagaatcagacaaggcactgctaccagagctacctggacttccaccga 614
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80 cgcttcccaaaccagaatcagacaaggcactgctaccagagctacctggacttccaccgg 139
Query: 615 tgccagaaggttcgcggcgaaaaatacgaaccctgcaactacttcatgcgtgtgtacaaa 674
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 tgccagaaggtccgcggcgaaaaatacgaaccctgcaactacttcatgcgtgtgtacaaa 199
Query: 675 tcactctgccccaatgaatgggttgataaatgggacacccagcgctccgagggcacgttc 734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 tcactctgccccaatgaatgggttgataaatgggacacccagcgctccgagggcacgttc 259
Query: 735 cccggcaggatctagagggtgctggcttagctatgtttatttataattcttatttcagat 794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 cccggcaggatctagagggtgctggcttagctatgtttatttataattcttatttcagat 319
Query: 795 agacgtgatatagattaaatgagttacatttaattatgttttatttccattattgtttac 854
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 agacgtgatatagattaaatgagttacatttaattatgttttatttccattattgtttac 379
Query: 855 ggctatgatagccaacgttgagaaaagtaaataaacaaatagataattaaaagagctttt 914
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ggctatgatagctaacgttgagaaaagtaaataaacaaatagataattaaaagagctttt 439
Query: 915 taatgaaaattaaagtgttaaatgggtccagggaaagcccctttctcccggagttcatcc 974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 taatgaaaattaaagtgttaaatgggtccagggaaagcccctttctcccggagttcatcc 499
Query: 975 cagtgttcgatccaaaagttggggcagatagtctggaagtatcttttgaatatcttgcaa 1034
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 cagtgttcgatccaaaagttggggcagatagtctggaagtatcttttgaatatcttgcaa 559
Query: 1035 tcgtctacatcgcccaaaagacgggtgcatttataatagtcgcagtagttgtcgtagcac 1094
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tcgtctacatcgcccaaaagacgggtgcatttataatagtcgcagtagttgtcgtagcac 619
Query: 1095 gccctggaaataacttccatattgttaaacaatattttatctcaatgccttgttctggat 1154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gccctggaaataacttccatattgttaaacaatattttatctcaatgccttgttctggat 679
Query: 1155 aaagatttctaatgtccttggcgtgcggcgatagaaaaaaaagttataattagcaacatg 1214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 aaagatttctaatgtccttggcgtgcggcgatagaaaaaaaagttataattagcaacatg 739
Query: 1215 tcaattatcgtgtacttatatga 1237
|||||||||||||||||||||||
Sbjct: 740 tcaattatcgtgtacttatatga 762
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 149,179
Number of extensions: 2736
Number of successful extensions: 2736
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 2736
Number of HSP's successfully gapped: 1
Length of query: 1249
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1232
Effective length of database: 8,119,229
Effective search space: 10002890128
Effective search space used: 10002890128
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)