BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10334 (UTR included)
(2119 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1704_C1 1816 0.0
>BF14_1704_C1
Length = 1073
Score = 1816 bits (916), Expect = 0.0
Identities = 969/987 (98%), Gaps = 1/987 (0%)
Strand = Plus / Plus
Query: 490 agactatcaggatggcacaaacgcttacactaggtgactcatgcgccccgataacttgtc 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 agactatcaggatggcacaaacgcttacactaggtgactcatgcgccccgataacttgtc 146
Query: 550 atgcgtggaataaggaaagaaatcaaatcgctttttctcccaataacaatgaagtgcata 609
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 147 atgcgtggaataaggaaagaaatcaaattgctttttctcccaataacaatgaagtgcata 206
Query: 610 tttaccaaaaggagggaaatgaatggaagcaaactaataatctggtggaacatgatatga 669
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 tttaccagaaggagggaaatgaatggaagcaaactaataatctggtggaacatgatatga 266
Query: 670 gggtcatgggaatagactgggctccgaatactaacaggattgtaacatgctctgtggacc 729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 gggtcatgggaatagactgggctccgaatactaacaggattgtaacatgctctgtggacc 326
Query: 730 gtaatgcttatgtctggacccaaagtgaagatgggaagtggactactaccctggtattgt 789
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 327 gtaatgcttatgtctggacccaaagtgaagatgggaagtggactactaccctggtgttgt 386
Query: 790 tgcgtataaacagagcagcaacatgtgttaaatggtctccgatggaaaacaaatttgcag 849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tgcgtataaacagagcagcaacatgtgttaaatggtctccgatggaaaacaaatttgcag 446
Query: 850 ttggctctggagctcgcctgatatccatttgctattttgaaaaggaaaacaattggtggg 909
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 447 ttggctctggagctcgcctgatatccatttgctattttgaaaaggaaaataattggtggg 506
Query: 910 tgtctaaacatattaaaaaaccaattcgctcaactgtaaccactttagattggcatccaa 969
| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 507 tctctaaacatattaaaaaaccaattcgctcaactgtcaccactttagattggcatccaa 566
Query: 970 ataatattctattggttgctggctcgactgattttaaagtaagagttttttccgcgtata 1029
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 567 ataatattctattggttgctggctcgactgattttaaagtaagagttttttccgcctata 626
Query: 1030 ttaaggatattgaggatcaacctggacctaatgtctgggggtctaagttgcctttaggtc 1089
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 627 ttaaggatattgaggatcaacctggacctaatgtctgggggtctaagttgcctctaggtc 686
Query: 1090 aattattggctgagtttccatctgctggaaatggatgggtgcatagtgtttccttttctg 1149
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 aattattggccgagtttccatctgctggaaatggatgggtgcatagtgtttccttttctg 746
Query: 1150 cagatggcaacaaagttgcttgggtgggccatgacagctctataaatgtagccgacgctt 1209
| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 747 ctgatggcaacaaagttgcttgggtgggccatgacagctctataaatgtagctgacgctt 806
Query: 1210 ctaatggaagggctg-ttatcaagcataggactgaatatctaccattcctaggatgcatt 1268
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 ctaatggaagggctgtttatcaagcataggactgaatatctaccattcctaggatgcatt 866
Query: 1269 tggatctcaaataattctttggtagtggcaggccatagctgcattccattactctactgc 1328
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 867 tggatctcaaataattctctggtagtggcaggccatagctgcattccattactctactgc 926
Query: 1329 catgacggaggggagattaagtttgttgcaaagttggacaatactcagaggaaagagtct 1388
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 927 catgacggaggggagattaagtttgttgcaaagttggacaatactcagannnnngagtct 986
Query: 1389 ggtggtttatctgctatgaagaagttccagtcgttggatagacaagctcgtattgaaacc 1448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 987 ggtggtttatctgctatgaagaagttccagtcgttggatagacaagctcgtattgaaacc 1046
Query: 1449 aatgatacctacttggactccatacat 1475
|||||||||||||||||||||||||||
Sbjct: 1047 aatgatacctacttggactccatacat 1073
Score = 163 bits (82), Expect = 1e-39
Identities = 82/82 (100%)
Strand = Plus / Plus
Query: 329 atattcgcgttgactgcccagagtccgcgaatcaaacattcaacgctactaataagttat 388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 atattcgcgttgactgcccagagtccgcgaatcaaacattcaacgctactaataagttat 66
Query: 389 tacttcgtgttaaataataaag 410
||||||||||||||||||||||
Sbjct: 67 tacttcgtgttaaataataaag 88
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 262,491
Number of extensions: 5774
Number of successful extensions: 5774
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5773
Number of HSP's successfully gapped: 2
Length of query: 2119
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2102
Effective length of database: 8,119,229
Effective search space: 17066619358
Effective search space used: 17066619358
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)