BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10335 (UTR included)
(1990 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01062B1E01 1620 0.0
>BF01062B1E01
Length = 847
Score = 1620 bits (817), Expect = 0.0
Identities = 832/838 (99%)
Strand = Plus / Plus
Query: 431 gaatatttcaaaacataaactattttatttccaaagtgtttatttgatagccaacaaaat 490
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 gaatatttcaaaatataaactattttatttccaaagtgtttatttgatagccaacaaaat 69
Query: 491 tgcttccacaatgacagtcacgcgggtagcggagtcccgcacagaatttaaattaaaaag 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 tgcttccacaatgacagtcacgcgggtagcggagtcccgcacagaatttaaattaaaaag 129
Query: 551 tctacctgaggacgctatatccagtgtgaaattcgcacctaaatctaatcaatttatatt 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 tctacctgaggacgctatatccagtgtgaaattcgcacctaaatctaatcaatttatatt 189
Query: 611 agtgtcttcatgggattgttctgtgagactgtacgacgtgtcagctaatatcgagagaca 670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 agtgtcttcatgggattgttctgtgagactgtacgacgtgtcagctaatatcgagagaca 249
Query: 671 taaatataatcacgaactgccagtgctggatgtttgctttagagatggagtccattcata 730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 taaatataatcacgaactgccagtgctggatgtttgctttagagatggagtccattcata 309
Query: 731 cagcggtggtttggatcagaccctcaagatgtatgacctgaacgctggtagtgagactgt 790
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 cagcggtggtttggatcagaccctcaagatgtatgacctgaacgctggtagtgagactgt 369
Query: 791 tctcggagaccataaaggcgccataagatgcgtggagtttgccagtgaagtgaatgctgt 850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 tctcggagaccataaaggcgccataagatgcgtggagtttgccagtgaagtgaatgctgt 429
Query: 851 gctgactgggagctgggatggtactgtcaagatgtgggatagcagagtgccaaattgtgt 910
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 gctgactgggagctgggatggtactgtcaagatgtgggatagcagagtgccaaattgtgt 489
Query: 911 gggcacttacaatcaagggaatgaaagagtttacacaatgagcattgttggtgagaagtt 970
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 gggcacttacaatcaagggaatgaaagagtttacacaatgagcattgttggtgagaagtt 549
Query: 971 tgtagtgggcacatcaggtcgcaagatatttgtgtgggatgttcgtaacatgggacatgt 1030
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 550 tgtagtgggcacatcaggtcgcaagatatttgtgtgggatgttcgaaacatgggacatgt 609
Query: 1031 aaatcaaagacgggaatcgtcactcaagtaccagaccagatgcatcagagtgttcccgaa 1090
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 aaatcaaagacgggaatcgtcactcaagtaccagaccagatgcatcagagtgttcccgaa 669
Query: 1091 caagcagggctatgtattgagttcaatagagggtcgagtggccgtcgagtatctggacag 1150
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 670 caagcagggctatgtattgagttcaatagagggtcgagtggccgttgagtatctggacag 729
Query: 1151 caatccagaggtccagaaaaagaaatatgccttcaaatgtcatagaataaaagatggtgg 1210
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 caatccagnnntccagaaaaagaaatatgccttcaaatgtcatagaataaaagatggtgg 789
Query: 1211 actagagaagatatatcctgtgaatgctatcagcttccactctgtgtacaatactttt 1268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 actagagaagatatatcctgtgaatgctatcagcttccactctgtgtacaatactttt 847
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 251,910
Number of extensions: 5441
Number of successful extensions: 5441
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5441
Number of HSP's successfully gapped: 1
Length of query: 1990
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1973
Effective length of database: 8,119,229
Effective search space: 16019238817
Effective search space used: 16019238817
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)