BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10344 (UTR included)
(3541 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2835_C1 1338 0.0
>BF14_2835_C1
Length = 715
Score = 1338 bits (675), Expect = 0.0
Identities = 706/715 (98%), Gaps = 1/715 (0%)
Strand = Plus / Plus
Query: 243 taatgtttctaaataaaaatatttttta-ttgttatgttacgtattatgttaataatagt 301
|||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 1 taatgtttctaaataaaaatatttttaaattgttatgttacgtattatgttaataatagt 60
Query: 302 atctaacagttgtcatagattggcactactataaagttaaaggagtgctgtatatagttt 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atctaacagttgtcatagattggcactactataaagttaaaggagtgctgtatatagttt 120
Query: 362 ttatttattaaaatttttagctcttagttgtgggaaggagatgcaatttttatttcctgt 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttatttattaaaatttttagctcttagttgtgggaaggagatgcaatttttatttcctgt 180
Query: 422 ttgaaatgttacttttgagagaaaacaaaataatacatttattaaatagctaaaaggcta 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttgaaatgttacttttgagagaaaacaaaataatacatttattaaatagctaaaaggcta 240
Query: 482 caaatataaaatatataaaatggattcggaaacagattggttgtgtgaaatattacaaaa 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 caaatataaaatatataaaatggattcggaaacagattggttgtgtgaaatattacaaaa 300
Query: 542 tgttcaactggaacagttttatttggcaattagagatcagcttcagattacacggttagc 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgttcaactggaacagttttatttggcaattagagatcagcttcagattacacggttagc 360
Query: 602 acattttgattatgtgcacgctgaagaccttgaaaagattggtattagcaagcctggaat 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 acattttgattatgtgcacgctgaagaccttgaaaagattggtattagcaagcctggaat 420
Query: 662 acgcaggctgcttgatgctgttaggaaaaagaagttgcagctatggaatcgaaagttttg 721
||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 421 acgcaggctacttgatgctgttaggaaaaagaagctgcagctatggaatcgaaagttttg 480
Query: 722 gaataagctgtttggttcgccaagttcaacatcgaaggaaaagactgatatagcagtaaa 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gaataagctgtttggttcgccaagttcaacatcgaaggaaaagactgatatagcagtaaa 540
Query: 782 gcctcaaacacagactgaatctcaaacaacatgtattattctggaaaaggatattgtgtt 841
||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 541 gcctcaaacacagacggaatctcaaacaacatgtataattctggaaaaggatattgtgtt 600
Query: 842 acacaatgagttaggtaatggatcatttggtgttgtgaaacggggggaatggaaggtgga 901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 601 acacaatgagttaggtaatggatcatttggtgttgtgaaacggggggaatggaaggtaga 660
Query: 902 tcaatcaaacaaaacgatgcctgttgccgttaaagtgttgaaggcggatgctttt 956
||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 661 tcaatcaaacaaaacaatgcctgttgccgttaaagtgttgaaggcagatgctttt 715
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 451,826
Number of extensions: 10378
Number of successful extensions: 10378
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 10377
Number of HSP's successfully gapped: 1
Length of query: 3541
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3523
Effective length of database: 8,109,745
Effective search space: 28570631635
Effective search space used: 28570631635
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)