BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10351 (UTR included)
(4159 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019B1G10 90 3e-17
BF14_729_C3 90 3e-17
BF01033B1B03 86 5e-16
BF01018A2H04 80 3e-14
BF01017A2H11 80 3e-14
BF01011A1H06 78 1e-13
BF14_729_C2 76 5e-13
BF01025A1D01 74 2e-12
BF01024A1H07 74 2e-12
BF01012A2C11 72 8e-12
BF01035X1C09 70 3e-11
BF01005B1E12 70 3e-11
BF14_2189_C1 70 3e-11
>BF01019B1G10
Length = 488
Score = 89.7 bits (45), Expect = 3e-17
Identities = 108/126 (85%), Gaps = 6/126 (4%)
Strand = Plus / Plus
Query: 124 aaaataaaactaatatttttcggattatactacgtatattttattatttttaaaaactac 183
||||||||| |||||||||||| ||| ||||||| ||||||||||||| |||||||||
Sbjct: 292 aaaataaaagtaatatttttcgcatt-tactacgcgaattttattatttt-aaaaactac 349
Query: 184 atatatactaccgacgtttcggttactttgcagcaaccgtgatcacaggcagatgagatg 243
||| | |||||||||||||| |||| ||| |||||||||||| ||||||||||||
Sbjct: 350 ataa----tcccgacgtttcggttccttttcagtaaccgtgatcacgggcagatgagata 405
Query: 244 tgaatg 249
||||||
Sbjct: 406 tgaatg 411
>BF14_729_C3
Length = 2041
Score = 89.7 bits (45), Expect = 3e-17
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 194 ccgacgtttcggttactttgcagcaaccgtgatcacaggcagatgagatgtgaatgt 250
|||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||
Sbjct: 1635 ccgacgtttcggttactttgcagcaaccgtgatcacgggcagacgaggtgtgaatgt 1579
>BF01033B1B03
Length = 826
Score = 85.7 bits (43), Expect = 5e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 186 atatactaccgacgtttcggttactttgcagcaaccgtgatcacaggcagatgagatgt 244
||||||| ||||| ||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 172 atatactcccgacttttcggttactttgcagcaaccgtgatcataggcagacgagatgt 230
>BF01018A2H04
Length = 679
Score = 79.8 bits (40), Expect = 3e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 188 atactaccgacgtttcggttactttgcagcaaccgtgatcacaggcagatgagatg 243
||||| |||| |||||||||||||||||| |||||||||||| |||||||||||||
Sbjct: 311 atactgccgaggtttcggttactttgcagtaaccgtgatcacgggcagatgagatg 256
>BF01017A2H11
Length = 713
Score = 79.8 bits (40), Expect = 3e-14
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 188 atactaccgacgtttcggttactttgcagcaaccgtgatcacaggcagatgagatgtgaa 247
||||| ||||||||| ||||||||| |||||||||||||||| |||||| |||||||||
Sbjct: 86 atactcccgacgttttggttacttttcagcaaccgtgatcacgggcagacgagatgtgag 27
Query: 248 tgta 251
||||
Sbjct: 26 tgta 23
>BF01011A1H06
Length = 739
Score = 77.8 bits (39), Expect = 1e-13
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 188 atactaccgacgtttcggttactttgcagcaaccgtgatcacaggcagatgagatgtga 246
||||| ||||||||||||||||||| ||| |||||||||||| |||||| |||||||||
Sbjct: 513 atactcccgacgtttcggttacttttcagtaaccgtgatcacgggcagacgagatgtga 455
>BF14_729_C2
Length = 1289
Score = 75.8 bits (38), Expect = 5e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 188 atactaccgacgtttcggttactttgcagcaaccgtgatcacaggcagatgaga 241
||||| ||||||||||||||||||| |||||||||||||||| |||||| ||||
Sbjct: 581 atactcccgacgtttcggttacttttcagcaaccgtgatcacgggcagacgaga 528
>BF01025A1D01
Length = 764
Score = 73.8 bits (37), Expect = 2e-12
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 194 ccgacgtttcggttactttgcagcaaccgtgatcacaggcagatgagat 242
||||||||||||||||||| |||||||||||||||| |||||| |||||
Sbjct: 437 ccgacgtttcggttacttttcagcaaccgtgatcacgggcagacgagat 485
>BF01024A1H07
Length = 726
Score = 73.8 bits (37), Expect = 2e-12
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 196 gacgtttcggttactttgcagcaaccgtgatcacaggcagatgagatgt 244
||||||||||||||||| |||||||||||||||| |||||| |||||||
Sbjct: 692 gacgtttcggttacttttcagcaaccgtgatcacgggcagacgagatgt 644
>BF01012A2C11
Length = 780
Score = 71.9 bits (36), Expect = 8e-12
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 194 ccgacgtttcggttactttgcagcaaccgtgatcac 229
||||||||||||||||||||||||||||||||||||
Sbjct: 257 ccgacgtttcggttactttgcagcaaccgtgatcac 292
>BF01035X1C09
Length = 778
Score = 69.9 bits (35), Expect = 3e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 197 acgtttcggttactttgcagcaaccgtgatcacaggcagatgagatg 243
||||||||||||||||||||||||||||||||| || ||| ||||||
Sbjct: 620 acgtttcggttactttgcagcaaccgtgatcacgggaagacgagatg 666
>BF01005B1E12
Length = 657
Score = 69.9 bits (35), Expect = 3e-11
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 194 ccgacgtttcggttactttgcagcaaccgtgatcacaggcagatgagatgt 244
|||| ||||||||||||||||||||||||||||||| | |||| |||||||
Sbjct: 350 ccgaggtttcggttactttgcagcaaccgtgatcacggccagacgagatgt 300
>BF14_2189_C1
Length = 1416
Score = 69.9 bits (35), Expect = 3e-11
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 194 ccgacgtttcggttactttgcagcaaccgtgatcacaggcagatgagatgtgaat 248
|||||||||| ||||||||||||||||||||||||| | |||| || ||||||||
Sbjct: 206 ccgacgtttctgttactttgcagcaaccgtgatcacggacagacgacatgtgaat 152
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 521,246
Number of extensions: 11444
Number of successful extensions: 11444
Number of sequences better than 1.0e-10: 13
Number of HSP's gapped: 11441
Number of HSP's successfully gapped: 13
Length of query: 4159
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4141
Effective length of database: 8,109,745
Effective search space: 33582454045
Effective search space used: 33582454045
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)