BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10360 (UTR included)
(1240 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01060B2G06 1045 0.0
>BF01060B2G06
Length = 584
Score = 1045 bits (527), Expect = 0.0
Identities = 554/563 (98%)
Strand = Plus / Plus
Query: 241 atatttttgctataaaaattcattttagtgacgactagcgaaaagtaaacaaaaataagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atatttttgctataaaaattcattttagtgacgactagcgaaaagtaaacaaaaataagt 60
Query: 301 aattttatactttatatttataactaataaacatttaacagctaccggtataaatgtttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aattttatactttatatttataactaataaacatttaacagctaccggtataaatgtttc 120
Query: 361 ggtgaaaatagtgtttcgacaaataaaaaagcaaatggtatcttcagatctgtaaattca 420
||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 121 ggtgaaaatagtgtttcgacaaataaaaaagtatatggtatcttcagatctgtaaattca 180
Query: 421 taaacacttatcagtgaaatttttctacatatagtagtgctgtttattgttacatagaaa 480
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 taatcacttatcagtgaaatttttctacatatagtagtgctgtttattgttacatagaaa 240
Query: 481 tcataaggatgtcgacggctatgacatttggtcagaaacaatttatacctactgcaccag 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ccataaggatgtcgacggctatgacatttggtcagaaacaatttatacctactgcaccag 300
Query: 541 ataaggggagctttcctttggatcatgatgggatttgcaaaaaaagtatggtcaggtaca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ataaggggagctttcctttggatcatgatgggatttgcaaaaaaagtatggtcaggtaca 360
Query: 601 tgaattgcttatatggtaacaatagtgacaattcaaagtgcagaactgaagccaaagaat 660
||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 361 tgaattgtttgtatggtaacaatagtgacaattcaaagtgcagaactgaagccaaagagt 420
Query: 661 acttagcttgccgaatggatcatggcttaatggctaaagaggattggtctaaattaggtt 720
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 421 acttagcttgccgaatggatcatggcttaatggctaaagaagattggtctaaattaggtt 480
Query: 721 ttaaagaattgtcatcataaagattgttaatgtttttgtttataactagtcttaattagt 780
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 481 ttaaagaattgtcatcataaagattgttaatgtttttgcttataactagtcttaattagt 540
Query: 781 aaattaaatgaatttgtgaataa 803
|||||||||||||||||||||||
Sbjct: 541 aaattaaatgaatttgtgaataa 563
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 259,898
Number of extensions: 19241
Number of successful extensions: 19241
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 19241
Number of HSP's successfully gapped: 1
Length of query: 1240
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1223
Effective length of database: 8,119,229
Effective search space: 9929817067
Effective search space used: 9929817067
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)