BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10363 (UTR included)
(2428 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01020B1F03 1402 0.0
>BF01020B1F03
Length = 738
Score = 1402 bits (707), Expect = 0.0
Identities = 722/727 (99%)
Strand = Plus / Plus
Query: 480 acttctttgttatatagtaacatggacattgacaatgacctaccgagttgtattcaggct 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 acttctttgttatatagtaacatggacattgacaatgacctaccgagttgtattcaggct 71
Query: 540 agatttaagtcagataccggtgaagaaactggtaacccattagatctaccattaaatata 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 agatttaagtcagataccggtgaagaaactggtaacccattagatctaccattaaatata 131
Query: 600 acgaaagatcaactctcactcatatgtaatgctcttttgaaagaggaagataaacccttc 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 acgaaagatcaactctcactcatatgtaatgctcttttgaaagaggaagataaacccttc 191
Query: 660 ctattttttgtaaaagatgtggaaataacatctactcttcaagatgcactagatgtatcc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 ctattttttgtaaaagatgtggaaataacatctactcttcaagatgcactagatgtatcc 251
Query: 720 aaacttaatactgaagaggtggtcgagattatatatcagcaacaggctgtgttcaaagtc 779
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 252 aaacttaatactgaagaggtggttgagattatatatcagcaacaggctgtgttcaaagtc 311
Query: 780 aggcctgttacgagatgtacaagttctataccagggcatgcagaagcagttatatccaca 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 aggcctgttacgagatgtacaagttctataccagggcatgcagaagcagttatatccaca 371
Query: 840 agtttcagcccatcgggtaaacatttagcaagtggttctggagatacaactgtcagattt 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 agtttcagcccatcgggtaaacatttagcaagtggttctggagatacaactgtcagattt 431
Query: 900 tgggatttaaacacccaaaccccccatcatgtatgcaaaggacattcaaattgggtgtta 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 tgggatttaaacacccaaaccccccatcatgtatgcaaaggacattcaaattgggtgtta 491
Query: 960 tgtatcagttggtcaccagatggcaccaagttggcatcagcatgtaaacaaggcaggata 1019
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 492 tgtatcagttggtcaccagatggcactaagttggcatcagcatgtaaacaaggcaggata 551
Query: 1020 atgatatgggatccattaacgggacaacagattgggaaaacgttgttaggtcataaacaa 1079
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 552 atgatatgggatccattaacgggacaacagattggaaaaacgttgttaggtcataaacaa 611
Query: 1080 tgggtgacagctcttgcatgggaaccctatattagaaatacagagtgccgtaaattagct 1139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 tgggtgacagctcttgcatgggaaccctatattagaaatacagagtgccgtaaattagct 671
Query: 1140 agctcatcaaaagacaccgatgtcagaatatgggacacagtaacaggaaattgtgtatta 1199
|| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 672 agttcatcaaaagacaccgatgtcagaatatgggacacagtaacgggaaattgtgtatta 731
Query: 1200 aatctga 1206
|||||||
Sbjct: 732 aatctga 738
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 290,527
Number of extensions: 5321
Number of successful extensions: 5321
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5321
Number of HSP's successfully gapped: 1
Length of query: 2428
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2411
Effective length of database: 8,119,229
Effective search space: 19575461119
Effective search space used: 19575461119
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)