BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10370 (UTR included)
(3070 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2538_C1 1513 0.0
BF14_1376_C1 624 e-178
>BF14_2538_C1
Length = 787
Score = 1513 bits (763), Expect = 0.0
Identities = 781/787 (99%)
Strand = Plus / Plus
Query: 530 acgacgtaaactgactactacttcatcgagtgataataacactaagcagaccccggtcga 589
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1 acgacgtaaactgactactacttcatcgagtgataataacactaagcagaccccagtcga 60
Query: 590 tatttataagaaagtcgtcgaattcgaagaagctgaggcgcagttacgttcagccgataa 649
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 61 tatttataagaaagtcgtcgaattcgaagaagctgaggcgcagttacgttcagcggataa 120
Query: 650 ggatgcagcgttgtttaaaaagatatgtcaagatgttcgccaattatttgccgaaatagc 709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggatgcagcgttgtttaaaaagatatgtcaagatgttcgccaattatttgccgaaatagc 180
Query: 710 agaattaaaagaaaaaggcactgatgaggcaaaagaaaaaatcaatgtaaaaagagtaga 769
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agaattaaaagaaaaagccactgatgaggcaaaagaaaaaatcaatgtaaaaagagtaga 240
Query: 770 ggcatcattgcatttagtagcattgaaaaagttaaacagattggaaaaggttcgtacaag 829
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggcatcattgcatttagtagcattgaaaaagttaaacagattggaaaaggttcgtacaag 300
Query: 830 agctggaagagaggctctgcacaaagaaaagcagagagttgattcaacacatctcctctt 889
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agctggaagagaggctctgcacaaagaaaagcagagagttgattcaacacatctcctctt 360
Query: 890 gcaaaatcttctctatgaagctgatcatcttaataaagaagtgacaaaatgcttacaatt 949
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gcaaaatcttctctatgaagctgatcatcttaataaagaagtgacaaaatgcttacaatt 420
Query: 950 taaatcaaaagatgaagaaatagaattaataccactagaagaattttacaaggaagcacc 1009
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 421 taaatcaaaagatgaagaaatagaattaataccactagaagagttttacaaggaagcacc 480
Query: 1010 aagtgaaatctctcggccggaagtaacaaaagcagatgagcatcaacttcaattggcaag 1069
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aagtgaaatctctcggccggaagtaacaaaagcagatgagcatcaacttcaattggcaag 540
Query: 1070 gcttgagtgggaattacgtcagcgaagggaacttgctggggcctgtagtgagttggtggc 1129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gcttgagtgggaattacgtcagcgaagggaacttgctggggcctgtagtgagttggtggc 600
Query: 1130 ttcaaaggaatgtgtggcagcagctatagctgcagcacggtcgaggctgaatgcactctc 1189
||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 601 ttcaaaggaatgtgtggcagcagctatagctgcagcacgatcgaggctggatgcactctc 660
Query: 1190 accgcatttgaaagatgttctgaaggctacaaaaccacttcaagaatgtctagctcttag 1249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 accgcatttgaaagatgttctgaaggctacaaaaccacttcaagaatgtctagctcttag 720
Query: 1250 attggatgaaaagagagatgagacgagagcagcatcacttctcccacctcctttattttt 1309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 attggatgaaaagagagatgagacgagagcagcatcacttctcccacctcctttattttt 780
Query: 1310 gctctac 1316
|||||||
Sbjct: 781 gctctac 787
>BF14_1376_C1
Length = 1234
Score = 624 bits (315), Expect = e-178
Identities = 315/315 (100%)
Strand = Plus / Minus
Query: 2756 tatattacaacagtctttatttttatttgtgtatagcattgaacaatatctttgaaaatt 2815
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1209 tatattacaacagtctttatttttatttgtgtatagcattgaacaatatctttgaaaatt 1150
Query: 2816 aaacacattatggacattataatttggcaaacaaatgatttatgtttcgatttaaaaaac 2875
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1149 aaacacattatggacattataatttggcaaacaaatgatttatgtttcgatttaaaaaac 1090
Query: 2876 acaaactgcattattatactatgtaatgggaaatacttaaaacaatttgcaacttaacct 2935
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1089 acaaactgcattattatactatgtaatgggaaatacttaaaacaatttgcaacttaacct 1030
Query: 2936 aaaaatgccgtatggttattggtcgataattaatgagatctccatagtatgtcaatatcg 2995
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1029 aaaaatgccgtatggttattggtcgataattaatgagatctccatagtatgtcaatatcg 970
Query: 2996 agatagtgctttcctcgccttcactccgtttaacactctacatattagttagttacagta 3055
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 969 agatagtgctttcctcgccttcactccgtttaacactctacatattagttagttacagta 910
Query: 3056 agttacataccgtga 3070
|||||||||||||||
Sbjct: 909 agttacataccgtga 895
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 374,098
Number of extensions: 6809
Number of successful extensions: 6809
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6809
Number of HSP's successfully gapped: 2
Length of query: 3070
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3052
Effective length of database: 8,109,745
Effective search space: 24750941740
Effective search space used: 24750941740
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)