BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10406 (UTR included)
(9559 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01055A1C07 1451 0.0
BF01023B1C11 1082 0.0
>BF01055A1C07
Length = 767
Score = 1451 bits (732), Expect = 0.0
Identities = 751/758 (99%)
Strand = Plus / Plus
Query: 4663 tggtgcgatgtcgacgtgtttttggggcgctggtggctctctcggtggaagagttagtag 4722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 tggtgcgatgtcgacgtgtttttggggcgctggtggctctctcggtggaagagttagtag 69
Query: 4723 aggccgccgatgcactgctagcgccagtgcgactcggtgtagtccgtccgactgcaccct 4782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 aggccgccgatgcactgctagcgccagtgcgactcggtgtagtccgtccgactgcaccct 129
Query: 4783 tcccgctagcgaccacttacgtagacctggtaaacggcagtgaagacctatttggcgtcg 4842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 tcccgctagcgaccacttacgtagacctggtaaacggcagtgaagacctatttggcgtcg 189
Query: 4843 aaccactctctacaggacattctcgaataacacactctcgaagggaatcgaatgtggcgg 4902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 aaccactctctacaggacattctcgaataacacactctcgaagggaatcgaatgtggcgg 249
Query: 4903 gtggtcgcggtgccgtagctggtggcacgtcgatggggagttccacattagtccctgatc 4962
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 gtggtcgcggtgccgtagccggtggcacgtcgatggggagttccacattagtccctgatc 309
Query: 4963 gttcctctacacctgtggccacggaatacccggatgacgtggcaggggaggctctgggag 5022
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gttcctctacacctgtggctacggaatacccggatgacgtggcaggggaggctctgggag 369
Query: 5023 gtgatgatgacgcttcggagactgatgagtctaacataccagcccccgtgccaccaacag 5082
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gtgatgatgacgcttcggagactgatgagtctaacataccagcccccgtgccaccaacag 429
Query: 5083 agtcgcaacatcacgacgaccccatgggtgacagaggacaagagcagcatgtggtggtag 5142
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 agtcacaacatcacgacgaccccatgggtgacagaggacaagagcagcatgtggtggtag 489
Query: 5143 aaaacggaacagaacgagctgaaggtggtgagagcgaaagtgaattagatttgcttgcgg 5202
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 aaaacggaacagaacgagccgaaggtggtgagagcgaaagtgaattagatttgcttgcgg 549
Query: 5203 aagcggaaacggagagtgactcagacgatcaagataacgctgaatcagcacagcggagtg 5262
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 550 aagcggaaacggagagtgactcagatgatcaagataacgctgaatcagcacagcggagtg 609
Query: 5263 tacagacaggagcaacgcaaggatcagatgccggcatagcatcgctattgctgtatccag 5322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 tacagacaggagcaacgcaaggatcagatgccggcatagcatcgctattgctgtatccag 669
Query: 5323 aagacgagagcggtgactccacgcagcccgaggacgaggactccgaggccggtgagactg 5382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 aagacgagagcggtgactccacgcagcccgaggacgaggactccgaggccggtgagactg 729
Query: 5383 acgaacaagatgcggaggcagagctgccactacatgat 5420
|||||||||||||||| ||||||||||||||||||||
Sbjct: 730 acgaacaagatgcgganncagagctgccactacatgat 767
>BF01023B1C11
Length = 850
Score = 1082 bits (546), Expect = 0.0
Identities = 546/546 (100%)
Strand = Plus / Plus
Query: 9014 taaattattacttgctatcaaaactaaaaactttggcttcgtgtaaatgtttatttgtaa 9073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taaattattacttgctatcaaaactaaaaactttggcttcgtgtaaatgtttatttgtaa 60
Query: 9074 tttcgttatgattcgtttaacgttcggtcccgtgagactgctgttgtattctatccctgt 9133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tttcgttatgattcgtttaacgttcggtcccgtgagactgctgttgtattctatccctgt 120
Query: 9134 tggttttatgatactatacatttgtatttatagagcgccatagacctacgtcaaatgtta 9193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tggttttatgatactatacatttgtatttatagagcgccatagacctacgtcaaatgtta 180
Query: 9194 gcactactagtacatacataatagtatgatttgtatatctttgacaaatatgactgaaaa 9253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcactactagtacatacataatagtatgatttgtatatctttgacaaatatgactgaaaa 240
Query: 9254 ttatatgactggggttatttgactcttattatatttatgaaacaattattgtccactttc 9313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttatatgactggggttatttgactcttattatatttatgaaacaattattgtccactttc 300
Query: 9314 taaattaggcctccatttattggacagcacaagtgcatagtcaactaatgaaataaatag 9373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 taaattaggcctccatttattggacagcacaagtgcatagtcaactaatgaaataaatag 360
Query: 9374 acttgttaagacattaacataattatagaattaactaggacttaaaattgtttcagtttt 9433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 acttgttaagacattaacataattatagaattaactaggacttaaaattgtttcagtttt 420
Query: 9434 atgatataacctcatgtggactaatgtgtcgcgcccatactacagtgtttttaaaattag 9493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atgatataacctcatgtggactaatgtgtcgcgcccatactacagtgtttttaaaattag 480
Query: 9494 cttgtttagtcaaattgtgactaacatattatatcgatgtgagataagaaatcgtcatta 9553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cttgtttagtcaaattgtgactaacatattatatcgatgtgagataagaaatcgtcatta 540
Query: 9554 tattta 9559
||||||
Sbjct: 541 tattta 546
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 120,748
Number of extensions: 12023
Number of successful extensions: 12023
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 12023
Number of HSP's successfully gapped: 2
Length of query: 9559
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 9541
Effective length of database: 8,109,745
Effective search space: 77375077045
Effective search space used: 77375077045
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)