BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10412 (UTR included)
(1747 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1047_C1 1100 0.0
BF01042A1A07 900 0.0
BF01011B2B12 82 3e-15
>BF14_1047_C1
Length = 770
Score = 1100 bits (555), Expect = 0.0
Identities = 564/567 (99%)
Strand = Plus / Plus
Query: 210 attttttatagcagcgtcctatttaaaccttcaatgataactgtgtggtggggatttgaa 269
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 204 attttttatagcagcgtcctatttaaaccttcaatgataacactgtggtggggatttgaa 263
Query: 270 cggttaattatgtttatgaaggaagtattcccgtctaactagcaaattacgagaggagaa 329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cggttaattatgtttatgaaggaagtattcccgtctaactagcaaattacgagaggagaa 323
Query: 330 cttcaattgagcgtggctccaaactccgcccacatgtcccgggcacttcatctgccaaat 389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cttcaattgagcgtggctccaaactccgcccacatgtcccgggcacttcatctgccaaat 383
Query: 390 ccgtttgttaatctggccgacacctccaacagcgtatagtcgcctggtacccccagtgct 449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ccgtttgttaatctggccgacacctccaacagcgtatagtcgcctggtacccccagtgct 443
Query: 450 gtttatccgaatctttatccgattttatccgggttacccggctttgtagcaatggatcat 509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gtttatccgaatctttatccgattttatccgggttacccggctttgtagcaatggatcat 503
Query: 510 ctctatttcattctatcagtgttctgtgtaggatatatccaatgttacggacaaaataat 569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ctctatttcattctatcagtgttctgtgtaggatatatccaatgttacggacaaaataat 563
Query: 570 tattatttcgaaaaccacaagtactgtgacgatctctcaccatatttcggtgaaatcgat 629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tattatttcgaaaaccacaagtactgtgacgatctctcaccatatttcggtgaaatcgat 623
Query: 630 ttggatcaaataaccggtatctggtatggcgttgaaaaaatacctcatactaaaggggag 689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ttggatcaaataaccggtatctggtatggcgttgaaaaaatacctcatactaaaggggag 683
Query: 690 tataaaatagaacatacaaatgaatgtttctatattgacataaaggaactttatattcag 749
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tataaaatagaacatacaaacgaatgtttctatattgacataaaggaactttatattcag 743
Query: 750 cctactcctccgacaccataccagcag 776
|||||||||||||||||||||||||||
Sbjct: 744 cctactcctccgacaccataccagcag 770
Score = 266 bits (134), Expect = 1e-70
Identities = 134/134 (100%)
Strand = Plus / Plus
Query: 1 tctgatgttcatgtgttcctagtatctaagtatgccgaggaaagctttcgttacgggaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 tctgatgttcatgtgttcctagtatctaagtatgccgaggaaagctttcgttacgggaaa 129
Query: 61 tttcgatgacttgagaaaattcttgaatcgggtcgggttttgaagacaattacaataaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 tttcgatgacttgagaaaattcttgaatcgggtcgggttttgaagacaattacaataaag 189
Query: 121 cactgttctataat 134
||||||||||||||
Sbjct: 190 cactgttctataat 203
>BF01042A1A07
Length = 521
Score = 900 bits (454), Expect = 0.0
Identities = 485/494 (98%), Gaps = 1/494 (0%)
Strand = Plus / Plus
Query: 867 ggactatggaaagacgattatcatattaaagtgaacacttcccacaaaggtttttggcct 926
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 ggactatggaaagacgattatcatattaaagtgaacacttcccacaaagggttttggcct 60
Query: 927 acggacgtgccatatggatctgtggacaaaatgtatcgcttcttcggtggagtgatccaa 986
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 61 acggacgtgccatatggatctgtggacaaaatgtatcgcttcttcggtggtgtgatccaa 120
Query: 987 gttttaaaagtatctcataaccatttggtactcaacttttgcatgaggttgcctcattcg 1046
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gttttaaaagtatctcataaccatttggtactcaacttttgcatgaggttgcctcattcg 180
Query: 1047 caactgtacagcgttgtgcttgcgaggaacgagaatcaattgacaccgggagatcttacc 1106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caactgtacagcgttgtgcttgcgaggaacgagaatcaattgacaccgggagatcttacc 240
Query: 1107 agcatccataatatattttccataaagaacctgtcaacatcctctctgaaacgagtctgt 1166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agcatccataatatattttccataaagaacctgtcaacatcctctctgaaacgagtctgt 300
Query: 1167 gaaagttcagctgtcagcttcaaactgtctggttcattgattttatgtttcttactaata 1226
|||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gaaagttcagctgttagcgtcaaactgtctggttcattgattttatgtttcttactaata 360
Query: 1227 ttttcaaaattacgtttgtgataacgaattatttactaagcataatttattaaatagatt 1286
||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 361 ttttcaaaattacatttgtgataacgaagtatttactaagcataatttattaaatagatt 420
Query: 1287 atttatatttaataaatg-ttttttaaaacaacgataatattattcttatactgtaataa 1345
|||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 421 atttatatttaataaatgtttttttaaaacaaccataatattattcttatattgtaataa 480
Query: 1346 aatatctttttata 1359
||||||||||||||
Sbjct: 481 aatatctttttata 494
>BF01011B2B12
Length = 769
Score = 81.8 bits (41), Expect = 3e-15
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 705 acaaatgaatgtttctatattgacataaaggaactttatattcag 749
||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acaaacgaatgtttctatattgacataaaggaactttatattcag 45
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 238,339
Number of extensions: 5108
Number of successful extensions: 5108
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 5107
Number of HSP's successfully gapped: 4
Length of query: 1747
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1730
Effective length of database: 8,119,229
Effective search space: 14046266170
Effective search space used: 14046266170
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)