BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10415 (UTR included)
(3724 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3398_C1 1602 0.0
>BF14_3398_C1
Length = 1039
Score = 1602 bits (808), Expect = 0.0
Identities = 820/824 (99%)
Strand = Plus / Plus
Query: 2901 tcgtgtcgtcccgtagctaccggtaattggggctgcggaagacgtcagcgaggtcaccct 2960
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 tcgtgtcgtcccgtggctaccggtaattggggctgcggaagacgtcagcgaggtcaccct 63
Query: 2961 cagttgaagctgctgctgcaatggctagcggccagcgtggcgggagtaccggcattattt 3020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 cagttgaagctgctgctgcaatggctagcggccagcgtggcgggagtaccggcattattt 123
Query: 3021 tattacactttcggaaatgaaaaattatttaagctggacacactggtccgtgtgctcact 3080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 tattacactttcggaaatgaaaaattatttaagctggacacactggtccgtgtgctcact 183
Query: 3081 gacaggaagtggacagtgggacaattagcaagagccgtgttaaagttcgctcgtcagacc 3140
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 184 gacaggaagtggacagtgggacaattagcaagagccgtgttaaagttcgcccgtcagacc 243
Query: 3141 ctacacgaaccacacgtcataccgaacaatcattcactcttcgatgaactgatcgggatc 3200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 ctacacgaaccacacgtcataccgaacaatcattcactcttcgatgaactgatcgggatc 303
Query: 3201 gagaaaaccgccgacgattattaaaaattcaaacataacaaaagttcacttcccaacact 3260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 gagaaaaccgccgacgattattaaaaattcaaacataacaaaagttcacttcccaacact 363
Query: 3261 actatatacactttagccgaactctcaacttgaaagggcaaataattaaaaaaataacat 3320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 actatatacactttagccgaactctcaacttgaaagggcaaataattaaaaaaataacat 423
Query: 3321 aatctatgtactttgcatgcctttaactctaccctaaataatataatttgaaagaaaaac 3380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 aatctatgtactttgcatgcctttaactctaccctaaataatataatttgaaagaaaaac 483
Query: 3381 atttattattatatcggagtcatagttctaaacgaacttaaaataatctaatatctacgt 3440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 atttattattatatcggagtcatagttctaaacgaacttaaaataatctaatatctacgt 543
Query: 3441 aaagattacatatgtatagaacatgtgaataattatatacagaaacagtttaatatgaaa 3500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 aaagattacatatgtatagaacatgtgaataattatatacagaaacagtttaatatgaaa 603
Query: 3501 acaagtgaatgtacattagaaatatttaataaattaacctttataaaaaatagcatacca 3560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 acaagtgaatgtacattagaaatatttaataaattaacctttataaaaaatagcatacca 663
Query: 3561 ttgtaatatatattatttacaaagctcaatacatgtttcgatgcatttatttcatttcaa 3620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 ttgtaatatatattatttacaaagctcaatacatgtttcgatgcatttatttcatttcaa 723
Query: 3621 atttcaatatttcattctaatataataattatcagaacgtttacaaagtcacaaattacg 3680
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 724 atttcaatatttcattctaatataataataatcagaacgtttacaaagtcacaaattacg 783
Query: 3681 acactaggttactcgtaaagatatctaagatactgatgattaca 3724
|||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 784 acacaaggttactcgtaaagatatctaagatactgatgattaca 827
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 477,270
Number of extensions: 10426
Number of successful extensions: 10426
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 10426
Number of HSP's successfully gapped: 1
Length of query: 3724
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3706
Effective length of database: 8,109,745
Effective search space: 30054714970
Effective search space used: 30054714970
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)