BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10421 (UTR included)
(1975 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01031B1C10 1261 0.0
>BF01031B1C10
Length = 644
Score = 1261 bits (636), Expect = 0.0
Identities = 642/644 (99%)
Strand = Plus / Plus
Query: 418 aatcaaagctataagtatttcactatttactacatatcgatacatattttgatttaaatt 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aatcaaagctataagtatttcactatttactacatatcgatacatattttgatttaaatt 60
Query: 478 tataaattatatttttaatgaaaatgagtactggaactccaataacgaaaaatattattc 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tataaattatatttttaatgaaaatgagtactggaactccaataacgaaaaatattattc 120
Query: 538 atgtcggaaaaaaatatgttcccatcgaagacggcagcaaagtatatttccactttcaaa 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atgtcggaaaaaaatatgttcccatcgaagacggcagcaaagtatatttccactttcaaa 180
Query: 598 catggaagttggggaaggacaggatattaatagacgacagtaggaaaatggggaaaaagg 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 catggaagttggggaaggacaggatattaatagacgacagtaggaaaatggggaaaaagg 240
Query: 658 aacctatggtgctagttattggacacaaatttaaacttgaatgctgggaaacaattatta 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aacctatggtgctagttattggacacaaatttaaacttgaatgctgggaaacaattatta 300
Query: 718 agatgatggccattggtgaagtcgcaagttttcacgtgaaaaaagagttagtatatagct 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agatgatggccattggtgaagtcgcaagttttcacgtgaaaaaagagttagtatatagct 360
Query: 778 acccatttgtgtccaaaactctcagagaattggatcaggagcagagaataaaacacagtt 837
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 361 acccatttgtgtccaaaactctcagagaattggatcaggagcagagaataaagcacagtt 420
Query: 838 gtacaatgacattgcacacagagggtataggctatgccgatttggatggtcttattaatc 897
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtacaatgacattgcacacggagggtataggctatgccgatttggatggtcttattaatc 480
Query: 898 aaccatgtgacttggagtttgttatcgaattattaaaagttgaaaattcaagtgaatatg 957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aaccatgtgacttggagtttgttatcgaattattaaaagttgaaaattcaagtgaatatg 540
Query: 958 agaaggaattatggcagatgagtactgaagagaaatttaatatgatccctgagctgaaaa 1017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 agaaggaattatggcagatgagtactgaagagaaatttaatatgatccctgagctgaaaa 600
Query: 1018 agaagggtaatatgctgtatggacagaaattatttgatgaagca 1061
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 agaagggtaatatgctgtatggacagaaattatttgatgaagca 644
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 311,025
Number of extensions: 7248
Number of successful extensions: 7248
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7248
Number of HSP's successfully gapped: 1
Length of query: 1975
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1958
Effective length of database: 8,119,229
Effective search space: 15897450382
Effective search space used: 15897450382
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)