BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10423 (UTR included)
(2668 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01055B2C03 1552 0.0
BF01021B1F06 1499 0.0
>BF01055B2C03
Length = 842
Score = 1552 bits (783), Expect = 0.0
Identities = 825/839 (98%)
Strand = Plus / Plus
Query: 1713 gttgaaataatgccgggagactatttagaaacaacatgcatatataacactgaagacaag 1772
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttgaaataatgccgggagactatttagaaacaacatgcatatataacactgaagacaaa 60
Query: 1773 atgaatgccactgtcggcggacatgcgatcacagacgagatgtgcgtcaactacatccac 1832
|||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 61 atgaatgctactgtcggcggacacgcgatcacggacgagatgtgcgtcaactacatccac 120
Query: 1833 tactaccccgccacagaactagaagtgtgcaagagcgcggtttccaataaggctttggaa 1892
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tactaccccgccacagaactagaagtgtgcaagagcgcggtttccaataaggctttggaa 180
Query: 1893 gactatttcaagtttgaaaaaatgtgggacaacatgtccatatcgttttcatcaccaccc 1952
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gactatttcaagtttgaaaaaatgtgggacaacatgtccatatcgttttcatcaccaccc 240
Query: 1953 agagccaactacctcgctattcaaccgtggactcctttaagatctagtgctctcaatgaa 2012
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agagccaactacctcgctattcaaccgtggactcctttaagatctagtgctctcaatgaa 300
Query: 2013 ctgtacactgagtcgcctatatctatgcagtgtaataaatcagatggaaaccgctttcag 2072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctgtacactgagtcgcctatatctatgcagtgtaataaatcagatggaaaccgctttcag 360
Query: 2073 ggagaatgggaaggacttcttgtgtcaaaaataaagttgccattgcctgaaaatacgaga 2132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggagaatgggaaggacttcttgtgtcaaaaataaagttgccattgcctgaaaatacgaga 420
Query: 2133 gcctgtccaatacagcgttatgtatttaaaaagtaacgattctaactatttatgaataat 2192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gcctgtccaatacagcgttatgtatttaaaaagtaacgattctaactatttatgaataat 480
Query: 2193 acctattcaatatgtatttaagttacaaagattatctgtataatgttatgagaactttta 2252
|| |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 481 acttattcaatatgtatttaagtaacaaaaattatctgtataatgttatgagaactttta 540
Query: 2253 aacaccttatataattgttatcagtgtaatataattctcttagtataatgactccattac 2312
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aacatcttatataattgttatcagtgtaatataattctcttagtataatgactccattac 600
Query: 2313 tataacataaggagtaatcggaaaagatttttattgcgttgacactgctacggtttatta 2372
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 601 tataacataaggagtaatcggaaaagatttttattacgttgacactgctacgggttatta 660
Query: 2373 tttatagtaaaaataaatgtattcaaaaatttttgtatttcaattgacttgttcagaata 2432
||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 661 tttattgtaaaaataaatgtattcaaaaattgttgtatttcaattgacttgttcagaatc 720
Query: 2433 atggctactatgatgaatattctatactaataaacacagttattaatattaccagttaag 2492
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 721 atggctactatgatgaatattctatattaataaacacagttattaatattaccagttaag 780
Query: 2493 tttttttttatattttacccatacatcttttcatgtattcgatctcatacatatataat 2551
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tttttttttatattttacccatacatcttttcatgtattcgatctcatacatatataat 839
>BF01021B1F06
Length = 790
Score = 1499 bits (756), Expect = 0.0
Identities = 781/790 (98%)
Strand = Plus / Plus
Query: 1054 tacccgatttcgtatcgaagaccgaacatcacattgtgaagtttcaatcacttataacca 1113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tacccgatttcgtatcgaagaccgaacatcacattgtgaagtttcaatcacttataacca 60
Query: 1114 aaggtaacgagggattggttcatcacatggaggtgttttattgcgatgcaaaaactgact 1173
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaggtaacgagggattggttcatcacatggaggtgttttattgcgatgcaaaaactgacg 120
Query: 1174 ttgaaattccattatatgaaggcaattgcttcgctaacgaaagaccagaaatgacaaagt 1233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttgaaattccattatatgaaggcaattgcttcgctaacgaaagaccagaaatgacaaagt 180
Query: 1234 tatgttcaaaggttaaagctgcttgggctatgggtgcaccgcccttcgtatacccaaaag 1293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tatgttcaaaggttaaagctgcttgggctatgggtgcaccgcccttcgtatacccaaaag 240
Query: 1294 aagcggggttgccgtttgggggacccgctgctaacaaatatgtcatgcttgaggtgcatt 1353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aagcggggttgccgtttgggggacccgctgctaacaaatatgtcatgcttgaggtgcatt 300
Query: 1354 ataataaccctgaaatgttagatgattgggtggatagttccggaattcttttatccataa 1413
|||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 301 ataataaccctgaaatgttagatgattgggtggatagttctggaattctattatccataa 360
Query: 1414 cggacaataaacgaaagtacgacgctgcgattatggagctggggctcgaatataccgata 1473
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 361 cggacaataaacgaaagtacgacgctgcgattatggagttggggctcgaatataccgata 420
Query: 1474 agatggccatccctgggggacaaaaggcttttcctttgactggatactgcattccacaat 1533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agatggccatccctgggggacaaaaggcttttcctttgactggatactgcattccacaat 480
Query: 1534 gtactggagtgggtcttccgttatccggtataagggtgtttggcagtcagctccacactc 1593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtactggagtgggtcttccgttatccggtataagggtgtttggcagtcagctccacactc 540
Query: 1594 acctgactggcgtggcggtgtggacgcggcacgctagagccggcatcgaactgcccctcc 1653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 acctgactggcgtggcggtgtggacgcggcacgctagagccggcatcgaactgcccctcc 600
Query: 1654 tcaatatagacctccattactctacccacttccaagaaataagattactacatcgtcctg 1713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tcaatatagacctccattactctacccacttccaagaaataagattactacatcgtcctg 660
Query: 1714 ttgaaataatgccgggagactatttagaaacaacatgcatatataacactgaagacaaga 1773
||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ttgaagtaatgccgggagattatttagaaacaacatgcatatataacactgaagacaaga 720
Query: 1774 tgaatgccactgtcggcggacatgcgatcacagacgagatgtgcgtcaactacatccact 1833
|||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 721 tgaatgccactgtcggcggacacgcgatcacagacgnnatgtgcgtcaactacatccact 780
Query: 1834 actaccccgc 1843
||||||||||
Sbjct: 781 actaccccgc 790
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 352,240
Number of extensions: 7846
Number of successful extensions: 7846
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7846
Number of HSP's successfully gapped: 2
Length of query: 2668
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2651
Effective length of database: 8,119,229
Effective search space: 21524076079
Effective search space used: 21524076079
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)