BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10424 (UTR included)
(1384 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01046B1A12 1005 0.0
>BF01046B1A12
Length = 619
Score = 1005 bits (507), Expect = 0.0
Identities = 531/539 (98%), Gaps = 1/539 (0%)
Strand = Plus / Plus
Query: 345 tttcattgcacttagtgaacttttgtgctattttccttgtttcacttaaattaagttttt 404
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 tttcattgcacttagtggacttttgtgctattttccttgtttcacttaaattaagttttt 70
Query: 405 aattattttatgtatcgtatgttttgaacttgacttatttcttgtttcgttattgaataa 464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 aattattttatgtatcgtatgttttgaacttgacttatttcttgtttcgttattgaataa 130
Query: 465 aactaaatacaccg-tatttgtaaaataaacattaaaatgtctagcgacaatggttttaa 523
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 aactaaatacaccganatttgtaaaataaacattaaaatgtctagcgacaatggttttaa 190
Query: 524 caacgatgattctccaaacaaatcccacacacatttgcaattgcccagccctattattac 583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 caacgatgattctccaaacaaatcccacacacatttgcaattgcccagccctattattac 250
Query: 584 tcgaagaaacagaactgcttcgacatcagaaaaggcgcttcaaaaccccatagaatacgg 643
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 251 tcgaagaaacagaactgcttcgacatcaaaaaaggcgcttcaaaaccccatagaatacgg 310
Query: 644 caaaataaaatcgttttgccgtgagaaaggccatggatttgtaactccattaaaaggcgg 703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 caaaataaaatcgttttgccgtgagaaaggccatggatttgtaactccattaaaaggcgg 370
Query: 704 tgaagatctttttctacatatttctgacatcgaaggggaatatgtgccgttgcctggtga 763
||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 371 tgaagatctttttctacatatttctgacatcganngggaatatgtgccattgcctggtga 430
Query: 764 tgaagttacctatcgcctgtgtccaataccaccaaaatttgaaaaatgccaagctgtaca 823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 tgaagttacctatcgcctgtgtccaataccaccaaaatttgaaaaatgccaagctgtaca 490
Query: 824 tgttcagattgtccaattagtccgagaaaggcatttaaagtggaatgagccacccctgt 882
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 tgttcagattgtccaattngtccgagaaaggcatttaaagtggaatgagccacccctgt 549
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 201,766
Number of extensions: 4297
Number of successful extensions: 4297
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4296
Number of HSP's successfully gapped: 1
Length of query: 1384
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1367
Effective length of database: 8,119,229
Effective search space: 11098986043
Effective search space used: 11098986043
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)