BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10426 (UTR included)
(6217 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01016B1D10 1088 0.0
>BF01016B1D10
Length = 735
Score = 1088 bits (549), Expect = 0.0
Identities = 577/586 (98%), Gaps = 4/586 (0%)
Strand = Plus / Plus
Query: 5310 cctgacttcttgacgccagccatccctcgccataaacctcaaccttccgtgtacaccgag 5369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 cctgacttcttgacgccagccatccctcgccataaacctcaaccttccgtgtacaccgag 213
Query: 5370 ccatcagactggcagaaggcggcggaggactgggtgcggcaccgagcccgggacgagagt 5429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 ccatcagactggcagaaggcggcggaggactgggtgcggcaccgagcccgggacgagagt 273
Query: 5430 acctcgactcctcgacacgcaacgcgtacaccccgccacgacgctcgcgccaccccccgc 5489
||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 274 acctcgactccgcgacacgcaacacgtacaccccgccacgacgctcgcgccaccccccgc 333
Query: 5490 cacgactctcgcggcacccctcgccacgactcacgcggcacaccgcggcacgacgcccgc 5549
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 334 cacgactctcgcggcacccctcgccacgactcacgcggcacactgcggcacgacgcccgc 393
Query: 5550 tcgtcggtccacagcacgccacacagcacgcctcacgccacgccacacggccacacgtcc 5609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tcgtcggtccacagcacgccacacagcacgcctcacgccacgccacacggccacacgtcc 453
Query: 5610 tccggccggtcgtcacgctcgcactccgcacgttccacgccgcacacgaacacgtcgccg 5669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 tccggccggtcgtcacgctcgcactccgcacgttccacgccgcacacgaacacgtcgccg 513
Query: 5670 cgctctatgtcattaggggacgcgacaccgctctacgacgagaattagatagctatggtt 5729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 cgctctatgtcattaggggacgcgacaccgctctacgacgagaattagatagctatggtt 573
Query: 5730 tttacttttgtatgagacttgtaaggtccgcgacgacggatcgctctgatgacgtcacca 5789
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 tttacttttgtatgagacttgtaaggtccgcgacgacggatcgctctgatgacgtcacca 633
Query: 5790 cactcgaaatacccccactcccctcccctcacacagctcactccggtgagagcacgtcgt 5849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 cactcgaaatacccccactcccctcccctcacacagctcactccggtgagagcacgtcgt 693
Query: 5850 cggtgtccgctgtgagtgtgctctggacgctcagcgaacggaatgt 5895
||||||||||| |||||| || |||||||||||||||||||||
Sbjct: 694 cggtgtccgct----gtgtgcactcgacgctcagcgaacggaatgt 735
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 85,157
Number of extensions: 9859
Number of successful extensions: 9859
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9854
Number of HSP's successfully gapped: 1
Length of query: 6217
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 6199
Effective length of database: 8,109,745
Effective search space: 50272309255
Effective search space used: 50272309255
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)