BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10436 (UTR included)
(5332 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01025A1G03 961 0.0
>BF01025A1G03
Length = 715
Score = 961 bits (485), Expect = 0.0
Identities = 497/501 (99%)
Strand = Plus / Plus
Query: 4330 cgtcgcgaactgactcagatctcacgaaactccaagatccatatcctcgtaagatccaac 4389
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1 cgtcgcgaactgactcagatctcacgaaactccaagatccataccctcgtaagatccaac 60
Query: 4390 tgccgtgcgccagtgaattaaaagaacgtatagcgcaagcgaaaaaccctgatgtcaaaa 4449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgccgtgcgccagtgaattaaaagaacgtatagcgcaagcgaaaaaccctgatgtcaaaa 120
Query: 4450 taccattgctggggaaactcggcaagaaaccatcagaagaagccagcggagaggatgaca 4509
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 121 taccattgctggggaagctcggcaagaaaccatcagaagaagccagcggagaggatgata 180
Query: 4510 agctgagatacaaaagattcgtcaagaaactcgacgagcctctgcaactggggaagttga 4569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agctgagatacaaaagattcgtcaagaaactcgacgagcctctgcaactggggaagttga 240
Query: 4570 ggcggccgatggagaaaacgtcgtcgctggaagaaaaaccgcccgtgctgaagataacgg 4629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggcggccgatggagaaaacgtcgtcgctggaagaaaaaccgcccgtgctgaagataacgg 300
Query: 4630 cattaaatcaagctgccaaaaacaaattctttggtgtcgaagacaagaaagagaagagca 4689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cattaaatcaagctgccaaaaacaaattctttggtgtcgaagacaagaaagagaagagca 360
Query: 4690 ccgatgaattgacggctgtggtcagaaaatatattccggtaaattcagtgtcacgtcaca 4749
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcgatgaattgacggctgtggtcagaaaatatattccggtaaattcagtgtcacgtcaca 420
Query: 4750 gtatagagggcggttcgggtagtgacggggagagcagcggcgggcgggaggtgcgacaca 4809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtatagagggcggttcgggtagtgacggggagagcagcggcgggcgggaggtgcgacaca 480
Query: 4810 tcaacactagaaggcagaggt 4830
|||||||||||||||||||||
Sbjct: 481 tcaacactagaaggcagaggt 501
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 566,630
Number of extensions: 10707
Number of successful extensions: 10707
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 10707
Number of HSP's successfully gapped: 1
Length of query: 5332
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 5314
Effective length of database: 8,109,745
Effective search space: 43095184930
Effective search space used: 43095184930
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)