BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DPGLEAN10441 (UTR included)
         (1787 letters)

Database: est 
           9484 sequences; 8,280,457 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BF01055A1D11                                                          365   e-100

>BF01055A1D11
          Length = 491

 Score =   bits (184), Expect = e-100
 Identities = 184/184 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1279 tgtcagtcgctcagtggaatcggcgctgaccagttcagagggcgagttgtcgtggttgga 1338
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53   tgtcagtcgctcagtggaatcggcgctgaccagttcagagggcgagttgtcgtggttgga 112

                                                                        
Query: 1339 tccaagagcggctcgggctgacgcgaccagacgcgccaagcacgcgccgccgactgacgc 1398
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113  tccaagagcggctcgggctgacgcgaccagacgcgccaagcacgcgccgccgactgacgc 172

                                                                        
Query: 1399 cgtcgtcttcgtggtgggcggcggcagttacatagaataccataacctgatagacttcgc 1458
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173  cgtcgtcttcgtggtgggcggcggcagttacatagaataccataacctgatagacttcgc 232

                
Query: 1459 aaag 1462
            ||||
Sbjct: 233  aaag 236


  Database: est
    Posted date:  Jul 14, 2011  2:25 PM
  Number of letters in database: 8,280,457
  Number of sequences in database:  9484
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 293,759
Number of extensions: 7596
Number of successful extensions: 7596
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7596
Number of HSP's successfully gapped: 1
Length of query: 1787
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1770
Effective length of database: 8,119,229
Effective search space: 14371035330
Effective search space used: 14371035330
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)