BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10456 (UTR included)
(2002 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01038B1F10 1400 0.0
BF01011B2H05 1039 0.0
>BF01038B1F10
Length = 746
Score = 1400 bits (706), Expect = 0.0
Identities = 736/746 (98%)
Strand = Plus / Plus
Query: 396 taaatcgtcttaagtgcattcacagctaaaagtatttgatatttataataattaattatt 455
||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 taaatcgtcttaagtgcatacacagctaaaagtattcgatatttataataattaattatt 60
Query: 456 ttaagtgacaagtttaattgataacgagtgtttataagtggtgcgatgtctataacaact 515
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 61 ttaagtgacaagtttaattgataacgagtgtttataagtggtgcgatgtctataactact 120
Query: 516 ctgtattattcacaactcaaaaaagaaaatgcacatgaggatgctatttggtgctgcagt 575
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 121 ctgtattattcacaactcaaaaaagaaaatgcacacgaggatgctatttggtgctgcagt 180
Query: 576 tggagccaaatatgtaaagaaaaaaaaaaagccgttgaagaaaataacgaaaatgtagaa 635
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 181 tggagccaaatatgtaaagaaaaaaagaaagccgttgaagaaaataacgaaaatgtagaa 240
Query: 636 aattcacaggattcaaatcactctgaagaagcaccacaaccagagaattatataataaca 695
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aattcccaggattcaaatcactctgaagaagcaccacaaccagagaattatataataaca 300
Query: 696 ggggggcttgatgacatcatcaaaatatggcagtttgataatggaaaactagaagtgaaa 755
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggggggcttgatgatatcatcaaaatatggcagtttgataatggaaaactagaagtgaaa 360
Query: 756 catcagttagaaggacattcattgggtgtcatctcagtggctgttagtcctgatggaaag 815
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 361 catcagttagaaggacattcattgggtgtcatctcggtggctgttagtcctgatggaaag 420
Query: 816 acattggcgagtagttctttagattcatcactaattctatgggatatagagtctggtgag 875
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 acattggcaagtagttctttagattcatcactaattctatgggatatagagtctggtgag 480
Query: 876 aaattaaaaactatggagacgggtacaacagatgtttggacattagacttttctccagac 935
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 481 aaattaaaaactatggagacgggtacaacagatgtttggacattggacttttctccagac 540
Query: 936 ggcaaacatgtgatctcaggaagcaatgccgggaaggtcatcatatttggagtagagagc 995
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ggcaaacatgtgatctcaggaagcaatgccgggaaggtcatcatatttggagtagagagc 600
Query: 996 ggcaaacaggaacaaacccttgacacgagaggaaaatttacattgagtgtagcttatagt 1055
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ggcaaacaggaacaaacccttgacacgagaggaaaatttacattgagtgtagcttatagt 660
Query: 1056 ccagacggtaaacacatagcaagtggtgcattggatggtatcatcaacatatttgatgtg 1115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ccagacggtaaacacatagcaagtggtgcattggatggtatcatcaacatatttgatgtg 720
Query: 1116 gcccaaggcaaattggtgcacaccct 1141
||||||||||||||||||||||||||
Sbjct: 721 gcccaaggcaaattggtgcacaccct 746
>BF01011B2H05
Length = 628
Score = 1039 bits (524), Expect = 0.0
Identities = 595/624 (95%), Gaps = 18/624 (2%)
Strand = Plus / Plus
Query: 416 cacagctaaaagtatttgatatttataataattaattattttaagtgacaagtttaattg 475
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 4 cacagctaaaagtatttgatatttataatannnaattattttaagtgacaagtttaattg 63
Query: 476 ataacgagtgtttataagtggtgcgatgtctataacaactctgt---------------- 519
||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 64 ataacgagtttttataagtggtgcgatgtctataacaactctgttcttttttctgtttta 123
Query: 520 --attattcacaactcaaaaaagaaaatgcacatgaggatgctatttggtgctgcagttg 577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 gtattattcacaactcaaaaaagaaaatgcacatgaggatgctatttggtgctgcagttg 183
Query: 578 gagccaaatatgtaaagaaaaaaaaaaagccgttgaagaaaataacgaaaatgtagaaaa 637
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 184 gagccaaatatgtaaagaaaaaaagaaagccgttgaagaaaataacgaaaatgtagaaaa 243
Query: 638 ttcacaggattcaaatcactctgaagaagcaccacaaccagagaattatataataacagg 697
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 ttcacaggattcaaatcactctgaagaagcaccacaaccagagaattatataataacagg 303
Query: 698 ggggcttgatgacatcatcaaaatatggcagtttgataatggaaaactagaagtgaaaca 757
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 ggggcttgatgatatcatcaaaatatggcagtttgataatggaaaactagaagtgaaaca 363
Query: 758 tcagttagaaggacattcattgggtgtcatctcagtggctgttagtcctgatggaaagac 817
|||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 364 tcagttagaagggcattcattgggtgtcatctcggtggctgttagtcctgatggaaagac 423
Query: 818 attggcgagtagttctttagattcatcactaattctatgggatatagagtctggtgagaa 877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 attggcgagtagttctttagattcatcactaattctatgggatatagagtctggtgagaa 483
Query: 878 attaaaaactatggagacgggtacaacagatgtttggacattagacttttctccagacgg 937
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 484 attaaaaactatggagacgggtacaacagatgtttggacattggacttttctccagatgg 543
Query: 938 caaacatgtgatctcaggaagcaatgccgggaaggtcatcatatttggagtagagagcgg 997
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 544 caaacatgtgatctcaggaagcaatgccgggaaggttatcatatttggagtagagagcgg 603
Query: 998 caaacaggaacaaacccttgacac 1021
||||||||||||||||||||||||
Sbjct: 604 caaacaggaacaaacccttgacac 627
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 370,079
Number of extensions: 10997
Number of successful extensions: 10997
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 10997
Number of HSP's successfully gapped: 3
Length of query: 2002
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1985
Effective length of database: 8,119,229
Effective search space: 16116669565
Effective search space used: 16116669565
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)