BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10470 (UTR included)
(3412 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01037B2D11 1495 0.0
>BF01037B2D11
Length = 799
Score = 1495 bits (754), Expect = 0.0
Identities = 787/799 (98%)
Strand = Plus / Plus
Query: 814 acccaagcaaatctacaagtaaacatgatacatctgagaaatcaaatagaagatcaaaga 873
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acccaagcaaatctacaagtaaacatgatacatctgagaaatcaaatagaagatcaaaga 60
Query: 874 ctgaagagaagtaccataagcaaacaaatggggattatagtggaaataagagaaaatatc 933
||||| | |||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 61 ctgaaaaaaagtaccataagcaaacaaacggggattatagtggaaataagagaaaatatc 120
Query: 934 aaagtagtgaggaggaagaccacgacaatacaaaaaaatctaaatactcacaagataacg 993
|||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 121 aaagtagtgaggaggaagaccatgatgatacaaaaaaatctaaatactcacaagataacg 180
Query: 994 gctataatataaaatcagaatcaagaaagaaaatagagtcatccgaaagtgaaaacagtg 1053
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gctataatataaaatcagaatcaagaaagaaaatagagtcatccgaaagtgaaaacagtg 240
Query: 1054 aggatgaatcatcacaaagtgatagtggcagtgaagatacaaagtcagaagatgaagaag 1113
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 241 aggatgaatcatcacaaagtgacagtggcagtgaagatacaaagtcagaagatgaagaag 300
Query: 1114 aagagatcccagatactgaagcaaaggtagtgaaaaatcaacacaaagagtcatataaac 1173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aagagatcccagatactgaagcaaaggtagtgaaaaatcaacacaaagagtcatataaac 360
Query: 1174 catcccatttgagacagtcatctagttcacatcaaagcaaacataagcatgaatcaagac 1233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 catcccatttgagacagtcatctagttcacatcaaagcaaacataagcatgaatcaagac 420
Query: 1234 atgatagagaagattcaaagcaaagcaaggaacataatgacagttctgataaaagacatt 1293
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 421 atgatagagaagattcaaagcaaagcaaggaacataatgacagttctgacaaaagacatt 480
Query: 1294 catctgacaaacccaaagacaagtcccacagttctcactcccacaaaagttctaaagggc 1353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 catctgacaaacccaaagacaagtcccacagttctcactcccacaaaagttctaaagggc 540
Query: 1354 atgaaaaaagtttagacaaaaaagacaaagaaaatagacattcagacaaagagaagcaaa 1413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 atgaaaaaagtttagacaaaaaagacaaagaaaatagacattcagacaaagagaagcaaa 600
Query: 1414 taaaagaagactcaagtaaacacagtactaaacatagatctggtagcagttcagataaaa 1473
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 601 taaaagaagactcaagtaaacacagtaataaacatagatctggtagcagttcagataaaa 660
Query: 1474 ccaagtcaagcggaactgacaaacacaagtctagtgagagttcacacaaacataagtcca 1533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ccaagtcaagcggaactgacaaacacaagtctagtgagagttcacacaaacataagtcca 720
Query: 1534 gcaagagtgaagataaacacagatcaagtagcagttcagagaaaaataaaaaacttgtac 1593
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 721 gcaagagtgaagataaacacagatcaagtagcagttcagnnnaaaataaaaaacttgtac 780
Query: 1594 ccgaatatcataaaagtca 1612
|||||||||||||||||||
Sbjct: 781 ccgaatatcataaaagtca 799
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 494,374
Number of extensions: 10892
Number of successful extensions: 10892
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 10888
Number of HSP's successfully gapped: 1
Length of query: 3412
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3394
Effective length of database: 8,109,745
Effective search space: 27524474530
Effective search space used: 27524474530
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)