BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10473 (UTR included)
(1456 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_486_C1 220 5e-57
BF01029B1B06 72 3e-12
>BF14_486_C1
Length = 3127
Score = 220 bits (111), Expect = 5e-57
Identities = 247/299 (82%), Gaps = 35/299 (11%)
Strand = Plus / Plus
Query: 348 cagcttcaatgacggatccaacatgaaaataacttaaggctgtcatcaattattataaca 407
||||||||| ||||||| |||||||||||||||| | || ||||||||||||||
Sbjct: 2676 cagcttcaacgacggatgcaacatgaaaataact-------ggcaccaattattataaca 2728
Query: 408 acttattggtcgtctttactattgttaaaagtaaaacgaaatcaaagactgtttaacagg 467
||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 2729 ccttattggtcgtcgttactattgttaaaagtaaaacgaaatcaaaga------------ 2776
Query: 468 agaatagaactatgtttgaattctggtataaatatgacgtctgaacgcactacagcggac 527
|||||||||||||||||||||||||| ||||||||||||||| |||||| |||| ||||
Sbjct: 2777 -gaatagaactatgtttgaattctggtttaaatatgacgtctggacgcacgacaggggac 2835
Query: 528 tgcggagttcagcgagtgcggatcataaagaatgtaattatgaagaaccttcgagaaata 587
|| |||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 2836 ggcagagttcagcgagtgcggagcata---------------aagaaccttcgagaaata 2880
Query: 588 caagaacatttagaagaattgaagtttcatttcaaaatgtctggaacgtacagaaacaa 646
||||||||| |||||||||||||||||||||| ||||| |||||||||||| |||||||
Sbjct: 2881 caagaacatctagaagaattgaagtttcattttaaaatatctggaacgtactgaaacaa 2939
>BF01029B1B06
Length = 765
Score = 71.9 bits (36), Expect = 3e-12
Identities = 56/60 (93%), Gaps = 2/60 (3%)
Strand = Plus / Minus
Query: 427 tattgttaaaagtaaaacgaaatcaaagact-gtttaacaggagaatagaactatgtttg 485
||||||||||||| ||||||||||| ||||| |||||| |||||||||||||||||||||
Sbjct: 652 tattgttaaaagtcaaacgaaatcagagactagtttaa-aggagaatagaactatgtttg 594
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 165,944
Number of extensions: 3613
Number of successful extensions: 3613
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 3613
Number of HSP's successfully gapped: 4
Length of query: 1456
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1439
Effective length of database: 8,119,229
Effective search space: 11683570531
Effective search space used: 11683570531
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)