BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10477 (UTR included)
(1900 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01050B1H08 1372 0.0
BF01046B2H03 640 0.0
>BF01050B1H08
Length = 749
Score = 1372 bits (692), Expect = 0.0
Identities = 713/721 (98%)
Strand = Plus / Plus
Query: 640 atacttatgttagaaacaaaatacaggcagcacgtgaagttggcattgaagcagaaacaa 699
||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||
Sbjct: 1 atacttatgttagaaacaaaatacaggcancnngtgaagttggcattgaagcggaaacaa 60
Query: 700 taagatatgatgctaatttaacggaagaggcattgatgtctataatagattcattgaata 759
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 61 taagatatgatgctaatttaacggaagaggcattaatgtctataatagattcattgaata 120
Query: 760 aggataaaaatattaacgggatattagtgcagctgcctttaccaaactctattgatgaga 819
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 121 aggataaaaatattaacgggatattagtgcagctgcctttaccaagctctattgatgaga 180
Query: 820 ggagagtgtgtaatgctttggctccggagaaggatgttgatggttttcatataacaaatg 879
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 181 ggagagtgtgtaatgctttggctccagagaaggatgttgatggttttcatataacaaatg 240
Query: 880 ttggtcagttgtgtctggacatgcccaccattgtaccagccacggccctcgctgtggttg 939
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 241 ttggtcagttgtgtctggacatgcccaccattgtaccagccactgccctcgctgtggttg 300
Query: 940 aaatgctgagaagattcaaaattgatacattcggtcgcaacacggtggttataggacgat 999
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaatgctgagaagattcaaaattgatacattcggtcgcaacacggtggttataggacgat 360
Query: 1000 ctaagaacgttggcatgccaatagccatgatgctacattctgacggccgccatgacagtg 1059
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctaagaacgttggcatgccaatagccatgatgctacattctgacggccgccatgacagtg 420
Query: 1060 gtctcggtatggactcaactgtcactatctgtcacagacacacgcctgctgatcaattgg 1119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtctcggtatggactcaactgtcactatctgtcacagacacacgcctgctgatcaattgg 480
Query: 1120 agttttattgtcgacacgctgatattattgttagcgcaaccggtctaccaaagcttatta 1179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agttttattgtcgacacgctgatattattgttagcgcaaccggtctaccaaagcttatta 540
Query: 1180 aggctgatatggtgaagccaggagccacgatcatagacgtcggcatcaccagagtaactg 1239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aggctgatatggtgaagccaggagccacgatcatagacgtcggcatcaccagagtaactg 600
Query: 1240 atgaaagcggaaagacaaaacttgttggcgatgttgattatgacgaggtagttaaagtgg 1299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 atgaaagcggaaagacaaaacttgttggcgatgttgattatgacgaggtagttaaagtgg 660
Query: 1300 ccggtgctataacccccgtccctggtggagtgggtcccatgacagtcgccatgttaatga 1359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ccggtgctataacccccgtccctggtggagtgggtcccatgacagtcgccatgttaatga 720
Query: 1360 a 1360
|
Sbjct: 721 a 721
>BF01046B2H03
Length = 821
Score = 640 bits (323), Expect = 0.0
Identities = 341/347 (98%)
Strand = Plus / Plus
Query: 1 atcgataaaatttgaactcgataaccctacaaacaaattttattagtgctaactgttaaa 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 475 atcgataaaatttgaactcgataaccctacaaacaaattttagtagtgctaactgttaaa 534
Query: 61 aagtagtattaactgatttatttggaataactggtttggatatgacaaataagatatcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 aagtagtattaactgatttatttggaataactggtttggatatgacaaataagatatcta 594
Query: 121 attatacattgtaacctaatgacctctgtacgtcaacagtaggtgatgaggcaaatcatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 attatacattgtaacctaatgacctctgtacgtcaacagtaggtgatgaggcaaatcatt 654
Query: 181 cgcttgaatgttctcagtacaattctgaattccaaaatgagaagtcacacatacaatgaa 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 cgattgaatgttctcagtacaattctgaattccaaaatgagaagtcacacatacaatgaa 714
Query: 241 tctttgggcacagccaggtaatatttggtagaaatacctaggtgttttttgcattgtgtt 300
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 715 tctttgggcacagccaggtaatatttattagaaatacctaggtgttttttgcattgtgtt 774
Query: 301 attatgtttatggcaacaagtttccccatgcactctttgtatgctgt 347
||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 775 attgtgttaatggcaacaagtttccccatgcactctttgtatgctgt 821
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 236,393
Number of extensions: 5032
Number of successful extensions: 5032
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5032
Number of HSP's successfully gapped: 2
Length of query: 1900
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1883
Effective length of database: 8,119,229
Effective search space: 15288508207
Effective search space used: 15288508207
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)