BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10482 (UTR included)
(3562 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2366_C1 1596 0.0
BF14_60_C1 92 7e-18
BF01024B1A09 72 7e-12
>BF14_2366_C1
Length = 1088
Score = 1596 bits (805), Expect = 0.0
Identities = 820/825 (99%)
Strand = Plus / Plus
Query: 2240 ggcagagctccgtaagcagcagaacaacgagacgctcaggagacagttcgcggagaaagc 2299
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ggcagagctccgcaagcagcagaacaacgagacgctcaggagacagttcgcggagaaagc 61
Query: 2300 caacgctgttggaccctggatcgagaggcagatggacgccgtcaccgccatcggcatggg 2359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 caacgctgttggaccctggatcgagaggcagatggacgccgtcaccgccatcggcatggg 121
Query: 2360 actacagggctctttggaagaccaattacatcggctgaaggagtacgaggcgggagtgta 2419
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 122 actacagggctctttggaagaccaattacatcggctgaaggagtacgaggccggagtgta 181
Query: 2420 cgcttacaaaccgcacatcgaagaactcgagcgcatccatcaagccgtgcaagagggcat 2479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 cgcttacaaaccgcacatcgaagaactcgagcgcatccatcaagccgtgcaagagggcat 241
Query: 2480 gatatttgagaacagatattcacaatacactatggagactcttcgtgtgggctgggagca 2539
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gatatttgagaacaggtattcacaatacactatggagactcttcgtgtgggctgggagca 301
Query: 2540 gctcttgacttccatcaaccgcaccatcaatgaagtggagaaccagatcctcacccgcga 2599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gctcttgacttccatcaaccgcaccatcaatgaagtggagaaccagatcctcacccgcga 361
Query: 2600 ctcgaagggcatcacccaggaacaactcactgaattccgcgcatcattcaaccacttcga 2659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ctcgaagggcatcacccaggaacaactcactgaattccgcgcatcattcaaccacttcga 421
Query: 2660 caaaaaccgcactggtcgtctggctcctgaagaactcaagtcttgcctcgtgtcactcgg 2719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 caaaaaccgcactggtcgtctggctcctgaagaactcaagtcttgcctcgtgtcactcgg 481
Query: 2720 atacagcatcggtaaagacaggcaaggggaactggacttccaacgcattcttgctgtcgt 2779
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ctacagcatcggtaaagacaggcaaggggaactggacttccaacgcattcttgctgtcgt 541
Query: 2780 cgaccctaacaacactggctacgtctcgttcgatgccttcttggacttcatgaccagaga 2839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 cgaccctaacaacactggctacgtctcgttcgatgccttcttggacttcatgaccagaga 601
Query: 2840 atcaactgacaccgacactgccgaacaggttattgacagcttcaggatcttagccggtga 2899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 602 atcaactgacaccgacactgccgaacaggttattgacagcttcaggatcttagccggaga 661
Query: 2900 caagccgtatataaccgcggacgagttgcgtcgtgagctgcctcccgaccaggcggagta 2959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 caagccgtatataaccgcggacgagttgcgtcgtgagctgcctcccgaccaggcggagta 721
Query: 2960 ctgcgtggctcgcatgccgccataccgtggaccgaacgctccgccacacgcactcgacta 3019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 ctgcgtggctcgcatgccgccataccgtggaccgaacgctccgccacacgcactcgacta 781
Query: 3020 catggccttctccaccgcactctacggggagactgacctctaagt 3064
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 catggccttctccaccgcactctacggggagactgacctctaagt 826
>BF14_60_C1
Length = 829
Score = 91.7 bits (46), Expect = 7e-18
Identities = 130/154 (84%), Gaps = 3/154 (1%)
Strand = Plus / Minus
Query: 3183 gcacttaacttgccaaggttatggcgtagtggagataagtttgcgc-tgtacacttagtg 3241
|||| |||| || ||||||| || ||| |||| ||||||||||||| |||||||||||||
Sbjct: 608 gcacataacctggcaaggttttgacgtggtggggataagtttgcgcatgtacacttagtg 549
Query: 3242 caacaaaaaatggttacctctgatgcttgtcaataac-aaaaactggtagcagtaacaaa 3300
||||||||| |||| || | ||||| | |||||||| ||||||| ||| ||||||| |
Sbjct: 548 caacaaaaagtggtaacttttgatgttcctcaataacgaaaaacttgtaacagtaaccta 489
Query: 3301 aacaatggg-taaatttaagtgctcgcaagtgta 3333
||||| ||| | |||||||||||||||||||||
Sbjct: 488 aacaaggggttgcatttaagtgctcgcaagtgta 455
>BF01024B1A09
Length = 801
Score = 71.9 bits (36), Expect = 7e-12
Identities = 93/109 (85%), Gaps = 6/109 (5%)
Strand = Plus / Minus
Query: 3231 tacacttagtgcaacaaaaaatggttacctctgatgcttgtcaataacaaaaactggtag 3290
||||||||| |||||||||| |||| || | ||||| |||||||||||| || |||
Sbjct: 285 tacacttagagcaacaaaaagtggtcacttttgatg----tcaataacaaaacctcgtaa 230
Query: 3291 cagtaacaaaaacaatgggta-aatttaagtgctcgcaagtgtactcgg 3338
||||||||||| ||| |||| |||||||||||||||||||||||||||
Sbjct: 229 cagtaacaaaa-caacgggtccaatttaagtgctcgcaagtgtactcgg 182
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 310,264
Number of extensions: 5911
Number of successful extensions: 5911
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 5908
Number of HSP's successfully gapped: 3
Length of query: 3562
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3544
Effective length of database: 8,109,745
Effective search space: 28740936280
Effective search space used: 28740936280
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)