BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10485 (UTR included)
(2761 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01024B2E08 1070 0.0
BF01013B2H07 636 0.0
>BF01024B2E08
Length = 548
Score = 1070 bits (540), Expect = 0.0
Identities = 546/548 (99%)
Strand = Plus / Plus
Query: 1651 tgacggagagttctcccgtgacgctgatgactccatactcgtacccgtacagtaaggtgg 1710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgacggagagttctcccgtgacgctgatgactccatactcgtacccgtacagtaaggtgg 60
Query: 1711 gctctgtgggtcagctggtgccgtctactcaggccagggtgacgtcactgactgacggca 1770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gctctgtgggtcagctggtgccgtctactcaggccagggtgacgtcactgactgacggca 120
Query: 1771 cacccctcggaccacaccacagcggggagctgcttctgaggggaccgcaggtaatgaaag 1830
|| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 121 catccctcggaccacaccacagcggggagctgcttctgaggggcccgcaggtaatgaaag 180
Query: 1831 gttactggaataatgagaaggcgacggcagaaacggttgatagtgagggctggctgcata 1890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gttactggaataatgagaaggcgacggcagaaacggttgatagtgagggctggctgcata 240
Query: 1891 caggagacgtggcctattacgacgaggacgggtacttctatatagttgacagaaccaaag 1950
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 caggagacgtggcctattacgacgaggacgggtacttctatatagttgacagaaccaaag 300
Query: 1951 agctcattaaagttaaaggcaatcaggtgtcaccaacagaaatagagagtataattatgg 2010
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agctcattaaagttaaaggcaatcaggtgtcaccaacagaaatagagagtataattatgg 360
Query: 2011 aaatacctgaaatcgcggatgttgcggtcgtgggaatccccgatgcgttagccggggaag 2070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aaatacctgaaatcgcggatgttgcggtcgtgggaatccccgatgcgttagccggggaag 420
Query: 2071 taccacgagccttcgtcgttctgaaaccaggaagtaaattaacagaaaaaaatatttacg 2130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 taccacgagccttcgtcgttctgaaaccaggaagtaaattaacagaaaaaaatatttacg 480
Query: 2131 atgtcgtagcagagaaactcaccaaatataagcatctcgaaggaggtgttgtattcgtag 2190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atgtcgtagcagagaaactcaccaaatataagcatctcgaaggaggtgttgtattcgtag 540
Query: 2191 aggctatt 2198
||||||||
Sbjct: 541 aggctatt 548
>BF01013B2H07
Length = 724
Score = 636 bits (321), Expect = 0.0
Identities = 324/325 (99%)
Strand = Plus / Plus
Query: 1818 caggtaatgaaaggttactggaataatgagaaggcgacggcagaaacggttgatagtgag 1877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 caggtaatgaaaggttactggaataatgagaaggcgacggcagaaacggttgatagtgag 432
Query: 1878 ggctggctgcatacaggagacgtggcctattacgacgaggacgggtacttctatatagtt 1937
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 ggttggctgcatacaggagacgtggcctattacgacgaggacgggtacttctatatagtt 492
Query: 1938 gacagaaccaaagagctcattaaagttaaaggcaatcaggtgtcaccaacagaaatagag 1997
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 gacagaaccaaagagctcattaaagttaaaggcaatcaggtgtcaccaacagaaatagag 552
Query: 1998 agtataattatggaaatacctgaaatcgcggatgttgcggtcgtgggaatccccgatgcg 2057
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 agtataattatggaaatacctgaaatcgcggatgttgcggtcgtgggaatccccgatgcg 612
Query: 2058 ttagccggggaagtaccacgagccttcgtcgttctgaaaccaggaagtaaattaacagaa 2117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 ttagccggggaagtaccacgagccttcgtcgttctgaaaccaggaagtaaattaacagaa 672
Query: 2118 aaaaatatttacgatgtcgtagcag 2142
|||||||||||||||||||||||||
Sbjct: 673 aaaaatatttacgatgtcgtagcag 697
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 364,768
Number of extensions: 9166
Number of successful extensions: 9166
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 9166
Number of HSP's successfully gapped: 2
Length of query: 2761
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2744
Effective length of database: 8,119,229
Effective search space: 22279164376
Effective search space used: 22279164376
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)