BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10534 (UTR included)
(1435 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1777_C1 1697 0.0
>BF14_1777_C1
Length = 1240
Score = 1697 bits (856), Expect = 0.0
Identities = 865/869 (99%)
Strand = Plus / Plus
Query: 567 gaggcggaggccgaccgcgcgccctccgcctccccgcacccacatgatcatcacgagacc 626
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 gaggcggaggccgaccgcgcgccctccgcctccccnnncccacatgatcatcacgagacc 60
Query: 627 caggcccagagttctccgggcagcagcacgaccgcgtcgtcgtctgcgaagggccgcgcg 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caggcccagagttctccgggcagcagcacgaccgcgtcgtcgtctgcgaagggccgcgcg 120
Query: 687 tccccagagcctcccctctacgacgatcctgaagccttccgcaacaacagcatcgcctgt 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tccccagagcctcccctctacgacgatcctgaagccttccgcaacaacagcatcgcctgt 180
Query: 747 ctccgggccaaggcacaggaacaccaggccaggctactgtccaacaacttgttactccag 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctccgggccaaggcacaggaacaccaggccaggctactgtccaacaacttgttactccag 240
Query: 807 gactatttccacttgcaggtgcgcggtctccagcgagcgggcagcgcgggcgcgccggtc 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gactatttccacttgcaggtgcgcggtctccagcgagcgggcagcgcgggcgcgccggtc 300
Query: 867 gacgacgacggccccaacgacatcgatgtcggcaccgagcctccgcccctcgacgcacgc 926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gacgacgacggccccaacgacatcgatgtcggcaccgagcctccgcccctcgacgcacgc 360
Query: 927 ctctactgacttgtgacacctgtcaaatgtcaactgtcagctgtcatggatgtagtgcct 986
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 361 ctctactgacttgtgacacctgtcaaatgtcaactgtcagctgtcatgtatgtagtgcct 420
Query: 987 actaccggaactatcactcgagtgtaattatgtacattgtacaagtatccgacgatcccc 1046
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 actaccggaactatcactcgagtgtaattatgtacattgtacaagtatccgacgatcccc 480
Query: 1047 agtttttcgtgcaatacccttagttaagtatttatccgtttagctgttgtgttagaattg 1106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agtttttcgtgcaatacccttagttaagtatttatccgtttagctgttgtgttagaattg 540
Query: 1107 tataaagttcgcccggctatagttgtgactatcctctatgaaacttatagatatgtcgta 1166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tataaagttcgcccggctatagttgtgactatcctctatgaaacttatagatatgtcgta 600
Query: 1167 agtgattaagactttaaatcgaatagattctttaaaataatcggtactaaataactctta 1226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 agtgattaagactttaaatcgaatagattctttaaaataatcggtactaaataactctta 660
Query: 1227 agtatattgtaaatgttggatgcctaagaaaattattgtgtcttatcggttcatgttcga 1286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 agtatattgtaaatgttggatgcctaagaaaattattgtgtcttatcggttcatgttcga 720
Query: 1287 agagcgaatcaaaattcgtttttctctgtaaactttaatgagcgactctgttgtacaata 1346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 agagcgaatcaaaattcgtttttctctgtaaactttaatgagcgactctgttgtacaata 780
Query: 1347 tatttttattataaattgtataaattaattgtatagcattgacgctaaatattcttaaga 1406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tatttttattataaattgtataaattaattgtatagcattgacgctaaatattcttaaga 840
Query: 1407 taaataaaattatacttacattactggct 1435
|||||||||||||||||||||||||||||
Sbjct: 841 taaataaaattatacttacattactggct 869
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 158,268
Number of extensions: 3463
Number of successful extensions: 3463
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3463
Number of HSP's successfully gapped: 1
Length of query: 1435
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1418
Effective length of database: 8,119,229
Effective search space: 11513066722
Effective search space used: 11513066722
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)