BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10563 (UTR included)
(4705 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2519_C1 1564 0.0
BF01060B2A02 511 e-144
>BF14_2519_C1
Length = 813
Score = 1564 bits (789), Expect = 0.0
Identities = 807/813 (99%)
Strand = Plus / Plus
Query: 2444 aacggaactgccgtcggacgaggaactggatcacattaaggatatgaaaaagtgggtaac 2503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1 aacggaactgccgtcggacgaggaactggatcacattaaggatatgaaaaagtgggtgac 60
Query: 2504 tcaaggcactgagctgtttaaccaaaaaccggagagaggaatagagttcctattggagca 2563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcaaggcactgagctgtttaaccaaaaaccggagagaggaatagagttcctattggagca 120
Query: 2564 cggagtgctgtcaacgccgttggatccgaagcaggtcgctatgtttctgagagagaatcc 2623
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 121 cggagtgctgtcaacgccgttggatccgaagcaggtcgctatgtttttgagagagaatcc 180
Query: 2624 agatttggataagaaaatgataggtgaatacatctgtaagcggtcatctcgtgatgaaga 2683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agatttggataagaaaatgataggtgaatacatctgtaagcggtcatctcgtgatgaaga 240
Query: 2684 ctccggacccagcatcctgtcggcgttcgcggatagtttcgactacaccggtctgaggat 2743
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctccggacccagcatcctgtcggcgttcgcggatagtttcgactacaccggtctgaggat 300
Query: 2744 cgaccaggccttgaggctttacctggagaccttccgtcttccgggagaagctccattgat 2803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cgaccaggccttgaggctttacctggagaccttccgtcttccgggagaagctccattgat 360
Query: 2804 atcactggttatggaaaagtttgctgagcggtggcatctaagcaacggcgaaccgttcgc 2863
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atcactggttatggaaaagtttgctgagcggtggcatctaagcaacggcgaaccgttcgc 420
Query: 2864 caacgctgacgccgcgttccgcctggcgtacgccgtcatcatgctcaacgtggaccaaca 2923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 caacgctgacgccgcgttccgcctggcgtacgccgtcatcatgctcaacgtggaccaaca 480
Query: 2924 caatcacaacgccaagaagctcaacgtgccgatgacggtcgaggactttacgagaaacct 2983
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 481 caatcacaacgccaagaagctcaacgtgccgatgacggtcgaggacttcacgagaaacct 540
Query: 2984 ccgagggtgcaacggctctgacgacttcgaccacgagttactgcagactatatttcacgc 3043
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ccgagggtgcaacggctctgacgacttcgaccacgagttactgcagactatatttcacgc 600
Query: 3044 tatcaagaacgaggagatgataatgccggcggagcgtgtgggtcctcttcgtgacgcgta 3103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tatcaagaacgaggagatgataatgccggcggagcgtgtgggtcctcttcgtgacgcgta 660
Query: 3104 tctgtggcgagtgctgcagcggcgctcgggtcgcacgcttctgtccgcgccgcccgcgcc 3163
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 661 tctgtggcgagtgctgcagcggcgctcgggtcgcacgctactgtccgcgccgcccgcgcc 720
Query: 3164 ccacagactgcacgctcgactactgccgcttgcagcgccgcctgcggtgacagcgttgtc 3223
|||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 721 ccacagactgcacgctcgactactgccgctggcagcgccgcccgcggtgacagcgttgtc 780
Query: 3224 ggcggcgttcgagcgcgccgctcccccgtctgc 3256
|||||||||||||||||||||||||||||||||
Sbjct: 781 ggcggcgttcgagcgcgccgctcccccgtctgc 813
>BF01060B2A02
Length = 266
Score = 511 bits (258), Expect = e-144
Identities = 264/266 (99%)
Strand = Plus / Plus
Query: 3493 gcgtggtggcggccagacacgcggactgctgtcgcgacagttggcgacacttgctcgaga 3552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcgtggtggcggccagacacgcggactgctgtcgcgacagttggcgacacttgctcgaga 60
Query: 3553 tagtcaacaccctgtatatagcgaggttgctgcccaaatgtttggtcgaggccgaagatt 3612
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 61 tagtcaacaccctgtatatagcgaggttgctgcccaaatgtttgatcgaggccgaagatt 120
Query: 3613 acctgtctcctaacgggacggtttccttgatacgagacacgtcacgcggcacagagagcg 3672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acctgtctcctaacgggacggtttccttgatacgagacacgtcacgcggcacagagagcg 180
Query: 3673 gcctcctgtccagtctatattcgtacatcgcgctcggagagagcggagtgcgagccccca 3732
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcctcctctccagtctatattcgtacatcgcgctcggagagagcggagtgcgagccccca 240
Query: 3733 ctcctcatgagaagagtttgatagac 3758
||||||||||||||||||||||||||
Sbjct: 241 ctcctcatgagaagagtttgatagac 266
Score = 83.8 bits (42), Expect = 2e-15
Identities = 42/42 (100%)
Strand = Plus / Plus
Query: 3948 ggagtgcgagcccccactcctcatgagaagagtttgatagac 3989
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 ggagtgcgagcccccactcctcatgagaagagtttgatagac 266
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 444,300
Number of extensions: 8625
Number of successful extensions: 8625
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 8624
Number of HSP's successfully gapped: 3
Length of query: 4705
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4687
Effective length of database: 8,109,745
Effective search space: 38010374815
Effective search space used: 38010374815
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)