BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10586 (UTR included)
(6022 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1354_C1 1683 0.0
>BF14_1354_C1
Length = 903
Score = 1683 bits (849), Expect = 0.0
Identities = 889/903 (98%)
Strand = Plus / Plus
Query: 321 cagaatccgattgtgaattatcagctcttttccaatttaattactgaaattacgtttttg 380
|||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 1 cagaatccgattgtgaattatcgggtcttttccaatttaattactgaaattacgtttttg 60
Query: 381 aagcctaaaacatgttatacttcaaagttttgataatatagtgttgtttgttttaagaca 440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aagcctaaaacatgttatacttcaaagttttgataatatagtgttgtttgttttaagaca 120
Query: 441 aacgtgttggaacattcttaaaatccaagggcatcttaggttgcctccacaaccataaaa 500
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aacgtgttagaacattcttaaaatccaagggcatcttaggttgcctccacaaccataaaa 180
Query: 501 atggcaaaatctcaaataaatacgaaatctagaaattatgttcaagacaaagaagcattt 560
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 181 atggcaaaatctcaaataaatacgaaatctagaaattatgtacaagacaaagaagcattt 240
Query: 561 ttgaaagaacttaagcagtttaatgaaagcaaaaatatcccttataaaataccggttgtt 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttgaaagaacttaagcagtttaatgaaagcaaaaatatcccttataaaataccggttgtt 300
Query: 621 aatggtgtagatatagatttgtatctcttgtattcattagttcaacaaagaggaggtctt 680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aatggtgtagatatagatttgtatctcttgtattcattagttcaacaaagaggaggtctt 360
Query: 681 agcaaagttaatcaaaatgatacctgggagacatttttgcgtcagctccacttgccacat 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agcaaagttaatcaaaatgatacctgggagacatttttgcgtcagctccacttgccacat 420
Query: 741 ccatgtgttaatgggtctacattattgaggagaatatatggaatgtatttggagaaatat 800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ccatgtgttaatgggtctacattattgaggagaatatatggaatgtatttggagaaatat 480
Query: 801 gaaagagctaaaggtccaccaggtagagatgatgacttagatatggacgacgaccctcgt 860
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 481 gaaagagctaaaggtccaccaggtagagatgatgacttagatatggacgatgaccctcgt 540
Query: 861 cgtggcaggggcggaggaatgccacgcatatcatttggtagcggcacttatatatcagct 920
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cgtggcaggggcggtggaatgccacgcatatcatttggtagcggcacttatatatcagct 600
Query: 921 tcgggtgaaccgcttcgtacaggaaatcgtgtggctggtccatctgaacgccttacatta 980
|||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 601 tcgggtgaaccgcttcgtacaggaaatcgtgtagctggtccgtctgaacgccttacatta 660
Query: 981 tcattgttgtctccgatgccgaatgagcaggattttgctgttaatgtttgcacagtacta 1040
|||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 661 tcattgttgtctcccatgccgaatgaacaggattttgccgttaatgtttgcacagtacta 720
Query: 1041 gccgctgatcattctaaccggcttccgttgagcacaacacctcatatactggatttcttg 1100
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gccgctgatcattctaaccgtcttccgttgagcacaacacctcatatactggatttcttg 780
Query: 1101 ctagctcatgctggagtttataatcactcaagcctccgcgatacaatcggccgctcatac 1160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ctagctcatgctggagtttataatcactcaagcctccgcgatacaatcggccgctcatac 840
Query: 1161 ttcgaatctcgcggtcggtatccccacgagttctggtcggagcgagctggtggtggcggg 1220
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 841 ttcgaatctcgcggtcggtatccccacgagttctggtcggnncgagctggtggtggcggg 900
Query: 1221 gcg 1223
|||
Sbjct: 901 gcg 903
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 76,545
Number of extensions: 8455
Number of successful extensions: 8455
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8455
Number of HSP's successfully gapped: 1
Length of query: 6022
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 6004
Effective length of database: 8,109,745
Effective search space: 48690908980
Effective search space used: 48690908980
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)