BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10595 (UTR included)
(2173 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01023B1E11 1007 0.0
>BF01023B1E11
Length = 613
Score = 1007 bits (508), Expect = 0.0
Identities = 520/524 (99%)
Strand = Plus / Plus
Query: 428 cacagaagtcacgtcttatatgtttgttagtggatcaaattttcagtgataaaatagtag 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cacagaagtcacgtcttatatgtttgttagtggatcaaattttcagtgataaaatagtag 60
Query: 488 tccagcctaaatcatgtctgacagtggagacagtgatgtttactgggtaccctataagga 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tccagcctaaatcatgtctgacagtggagacagtgatgtttactgggtaccctataagga 120
Query: 548 aagaccggagtggagcgatataactcccgttcccgaagatgatgggattacaccagtagt 607
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 121 aagaccggagtggagcgatataactcccgttcctgaagatgatgggattacaccagtagt 180
Query: 608 ggtcattgcacattccgaaaagttcaaagacgtctatgattactttagggcagtactgca 667
|||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 181 ggtcatcgcacattccgaaaagttcaaagatgtctatgattactttagggcagtactgca 240
Query: 668 gaagaatgaaaaatcagagcgagctttacatctcacaaaggaggctgtggaactaaatcc 727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaagaatgaaaaatcagagcgagctttacatctcacaaaggaggctgtggaactaaatcc 300
Query: 728 agcaaattataccgtgtggcaatataggagagatctgctcaaagaattagcgacagatct 787
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 301 agcaaattataccgtgtggcaatataggagagatcttctcaaagaattagcgacagatct 360
Query: 788 gagatcggagttgtattatgttgaatgtgtcataaaacagtcgccaaagaattaccaggt 847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gagatcggagttgtattatgttgaatgtgtcataaaacagtcgccaaagaattaccaggt 420
Query: 848 gtggcatcacagacgtgtgttggtcgaatggcttcaagatccgtcccaagaattggattt 907
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtggcatcacagacgtgtgttggtcgaatggcttcaagatccgtcccaagaattggattt 480
Query: 908 gacgggagacactctcatatcagaccctaagaattatcatgcat 951
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gacgggagacactctcatatcagaccctaagaattatcatgcat 524
Score = 555 bits (280), Expect = e-157
Identities = 289/292 (98%)
Strand = Plus / Plus
Query: 950 atataggagagatcttctcaaagaattagcgacagatctgagatcggagttgtattatgt 1009
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 atataggagagatcttctcaaagaattagcgacagatctgagatcggagttgtattatgt 381
Query: 1010 tgaatgtgtcataaaacagtcgccaaagaattaccaggtgtggcatcacagacgtgtgtt 1069
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tgaatgtgtcataaaacagtcgccaaagaattaccaggtgtggcatcacagacgtgtgtt 441
Query: 1070 ggtcgaatggcttcaagatccgtcccaagaattggatttgacgggagacactctcatatc 1129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ggtcgaatggcttcaagatccgtcccaagaattggatttgacgggagacactctcatatc 501
Query: 1130 agaccctaagaattatcatgcgtggcaacaccgacagtgggcgattaaaacttttggact 1189
||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||
Sbjct: 502 agaccctaagaattatcatgcatggcaacaccgacaatgggcgatcaaaacttttggact 561
Query: 1190 atttgataaagagctggagtttgtggacaatcttatatctgaagatgtccgc 1241
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 atttgataaagagctggagtttgtggacaatcttatatctgaagatgtccgc 613
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 285,705
Number of extensions: 5452
Number of successful extensions: 5452
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5452
Number of HSP's successfully gapped: 2
Length of query: 2173
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2156
Effective length of database: 8,119,229
Effective search space: 17505057724
Effective search space used: 17505057724
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)