BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10599 (UTR included)
(1822 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01030A1C07 1471 0.0
>BF01030A1C07
Length = 774
Score = 1471 bits (742), Expect = 0.0
Identities = 757/762 (99%)
Strand = Plus / Plus
Query: 594 aatggccagagatgctcacccgaggggaaggctctgaaaagacttttgcctgaagcatta 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 aatggccagagatgctcacccgaggggaaggctctgaaaagacttttgcctgaagcatta 72
Query: 654 aggacgaaatgcgttcggtgtacggagagacagaaaaaaatcgctgttaaaattataaaa 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 aggacgaaatgcgttcggtgtacggagagacagaaaaaaatcgctgttaaaattataaaa 132
Query: 714 cgtttgaaaatcgaatatcctgacgaatgggcaaaactgcagtccaagtgggacccgact 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 cgtttgaaaatcgaatatcctgacgaatgggcaaaactgcagtccaagtgggacccgact 192
Query: 774 ggcgacttcactagatacttcgaggtgttcctagctaacgagcaattcaattcgatttcc 833
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 193 ggcgacttcactagatacttcgaggtgttcctagctaacgagcaattcaattcaatttcc 252
Query: 834 ggagagggtaatgaaccatctctgccgtctctgccatctctaccacctctaccacctcta 893
||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 253 ggagagggtaacgaaccatctctgccatctctgccatctctaccacctctaccacctctg 312
Query: 894 ccaccgctaccaccgcaaacaagctcaccacagccagcgaccacagcaccaaccccgccc 953
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ccaccgctaccaccgcaaacaagctcaccacagccagcgaccacagcaccaaccccgccc 372
Query: 954 cggccgttgctgctgaacaggtttgctgatgaggttatggaggtgagtccttcgtccgct 1013
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 cggccgttgctgctgaacaggtttgctgatgaggttatggaggtgagtccttcgtccgct 432
Query: 1014 gtgacgccgatgcgaccatctactacgaggcctaccacctctaagcccgccacagtgagg 1073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gtgacgccgatgcgaccatctactacgaggcctaccacctctaagcccgccacagtgagg 492
Query: 1074 cctaccaccacaagatcacctacaatgagacaaccggtgccacccagacccacaccagtg 1133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 cctaccaccacaagatcacctacaatgagacaaccggtgccacccagacccacaccagtg 552
Query: 1134 tcctgggccaacgctggttctgaatcaatgccaactcgtttcactttacgaccgacaaaa 1193
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 553 tcctgggccaacgctggttctgaatcaatgccaacacgtttcactttacgaccgacaaaa 612
Query: 1194 tctgaattgcctctaccatattccacggcaataacgctgatcgatcaaattggaatcaaa 1253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 tctgaattgcctctaccatattccacggcaataacgctgatcgatcaaattggaatcaaa 672
Query: 1254 attataagaacgactgaactcgtcaccgacatattaaaaaacacagtccgagctgttgtt 1313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 attataagaacgactgaactcgtcaccgacatattaaaaaacacagtccgagctgttgtt 732
Query: 1314 ggacggtagacagtgacgtttgatgtttgacagatatgacat 1355
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 ggacggtagacagtgacgtttgatgtttgacagatatgacat 774
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 273,998
Number of extensions: 6441
Number of successful extensions: 6441
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6434
Number of HSP's successfully gapped: 1
Length of query: 1822
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1805
Effective length of database: 8,119,229
Effective search space: 14655208345
Effective search space used: 14655208345
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)