BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10614 (UTR included)
(2818 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01037A1A07 1487 0.0
BF14_1286_C1 214 6e-55
>BF01037A1A07
Length = 758
Score = 1487 bits (750), Expect = 0.0
Identities = 756/758 (99%)
Strand = Plus / Plus
Query: 251 cgtgcttgacgatatcgtagtttgaaatatagatttaaattttactacgcttctagaggt 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgtgcttgacgatatcgtagtttgaaatatagatttaaattttactacgcttctagaggt 60
Query: 311 ataagtcattatggcccagcaagaaatttcttgtggcctagattatacaattgctccaga 370
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 61 ataagtcattatggcccagcaagaaatttcttgtggcctagattatacaattgctctaga 120
Query: 371 tttacaagcatgtcttactgaagcattgcatgctaattatgcatttattgtatctcaaat 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tttacaagcatgtcttactgaagcattgcatgctaattatgcatttattgtatctcaaat 180
Query: 431 tgtacatccacgcttccggctgtcttcgctgccttcaggcaatactgttgggggttttac 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgtacatccacgcttccggctgtcttcgctgccttcaggcaatactgttgggggttttac 240
Query: 491 gcggtcagatatgatattatctcctcaagactggaatagccgagttgttggaagagtgtc 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gcggtcagatatgatattatctcctcaagactggaatagccgagttgttggaagagtgtc 300
Query: 551 tggttatttagatccagattctccatcacatatagtacaaaaacgtcatgaagactcttt 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tggttatttagatccagattctccatcacatatagtacaaaaacgtcatgaagactcttt 360
Query: 611 gaatgaggaactagcttattgccgaggtctaggtcttccagctgttatgttatcactaca 670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaatgaggaactagcttattgccgaggtctaggtcttccagctgttatgttatcactaca 420
Query: 671 ttcaagaaaatcaaataatttagctagaatcttacaaacttattttgaaacgagccacca 730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttcaagaaaatcaaataatttagctagaatcttacaaacttattttgaaacgagccacca 480
Query: 731 tccgacactaatttggacgagtgtgcctatgatttgtcacagaaccatgagagtctgtga 790
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tccgacactaatttggacgagtgtgcctatgatttgtcacagaaccatgagagtctgtga 540
Query: 791 tgaagataacagtaacgaagaagcttggaatgaaccatggcactggtggaccaaatttca 850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tgaagataacagtaacgaagaagcttggaatgaaccatggcactggtggaccaaatttca 600
Query: 851 tgaatgtatgggttgggataaaagaattggtgttgtattagaaatatcagccgatttacc 910
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tgaatgtatgggttgggataaaagaattggtgttgtattagaaatatcagccgatttacc 660
Query: 911 ctcaaaagatattgtaaacaggtggcttggtgaaccagtaaaggccattatattacctac 970
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ctcaaaagatattgtaaacaggtggcttggtgaaccagtaaaggccattatattacctac 720
Query: 971 ctcactcttccataataataaaaagggttatcctgtct 1008
||||||||||||||| ||||||||||||||||||||||
Sbjct: 721 ctcactcttccataacaataaaaagggttatcctgtct 758
>BF14_1286_C1
Length = 1424
Score = 214 bits (108), Expect = 6e-55
Identities = 108/108 (100%)
Strand = Plus / Minus
Query: 2560 aacactatacgtacaatatgtctttatttaacattaagtttaactatattcatctctcta 2619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1424 aacactatacgtacaatatgtctttatttaacattaagtttaactatattcatctctcta 1365
Query: 2620 tgaaaatcatcaatatcttgatcccatctcttttcaaaatagatacct 2667
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1364 tgaaaatcatcaatatcttgatcccatctcttttcaaaatagatacct 1317
Score = 95.6 bits (48), Expect = 4e-19
Identities = 48/48 (100%)
Strand = Plus / Minus
Query: 2771 ataccttgtaaaaaagcggcattttttccagttttaatagcccaaggt 2818
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1322 ataccttgtaaaaaagcggcattttttccagttttaatagcccaaggt 1275
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 352,599
Number of extensions: 7361
Number of successful extensions: 7361
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7361
Number of HSP's successfully gapped: 3
Length of query: 2818
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2801
Effective length of database: 8,119,229
Effective search space: 22741960429
Effective search space used: 22741960429
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)