BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10615 (UTR included)
(4972 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1876_C1 1540 0.0
>BF14_1876_C1
Length = 1094
Score = 1540 bits (777), Expect = 0.0
Identities = 806/814 (99%), Gaps = 5/814 (0%)
Strand = Plus / Plus
Query: 4162 aaagagaaagacaacgtcaggaaacagaaaggcggcatcccgaggatgacaaaatgaggg 4221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 aaagagaaagacaacgtcaggaaacagaaaggcggcatcccgaggatgacaaaatgaggg 62
Query: 4222 tcggtgtgagtgcacgcaaggtggagagcgcggaagtgtcgtcaccgtcagtgtcgccgg 4281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 tcggtgtgagtgcacgcaaggtggagagcgcggaagtgtcgtcaccgtcagtgtcgccgg 122
Query: 4282 tggcgcgcggctccccgcccgcagcgcccgctgctccgcccgcgcccgcagcacccgaca 4341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 tggcgcgcggctccccgcccgcagcgcccgctgctccgcccgcgcccgcagcacccgaca 182
Query: 4342 agccgcctatctctgaacgtgaccggctccggcaacgagaacaggaacgcagaaggagag 4401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 agccgcctatctctgaacgtgaccggctccggcaacgagaacaggaacgcagaaggagag 242
Query: 4402 aggcgttggctgggcaaattgacatgaatttccaaagcgatacgatggcggcctttgaag 4461
| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 aagcgctggctgggcaaattgacatgaatttccaaagcgatacgatggcggcctttgaag 302
Query: 4462 aaacactgtaatgtgttgtgctggccttatgttaaattgtacatatgagtatataaagta 4521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 aaacactgtaatgtgttgtgctggccttatgttaaattgtacatatgagtatataaagta 362
Query: 4522 aataatatgtcaatgcaatgtatacatatggtgatagtatgacaccagagtgacgtgatc 4581
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 363 aataatatgtcaatgcaatgtatacatatggtgatagtatgacaccagagtgacatgatc 422
Query: 4582 gttttgtgtgtgaattgttgactaacaatgtggttaagtgctgtgaatagatatacttat 4641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 gttttgtgtgtgaattgttgactaacaatgtggttaagtgctgtgaatagatatacttat 482
Query: 4642 tataaattaaaatgttgtactatcaatcttgacttcttggttgcgtgctgtaggcattga 4701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 tataaattaaaatgttgtactatcaatcttgacttcttggttgcgtgctgtaggcattga 542
Query: 4702 cgagggggtagcattttaaaataactgtaatataataagtttgtatgcaagttcttgatg 4761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 cgagggggtagcattttaaaataactgtaatataataagtttgtatgcaagttcttgatg 602
Query: 4762 taaactctctttacacttgtaagcctataatatatttatattttgttgtaggagcgtcta 4821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 taaactctctttacacttgtaagcctataatatatttatattttgttgtaggagcgtcta 662
Query: 4822 ccttccaacttgttttatagtatgtactaataataaatagaatggtagtaattgaaattg 4881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 ccttccaacttgttttatagtatgtactaataataaatagaatggtagtaattgaaattg 722
Query: 4882 aaaaaaaaaaaatcaaa---attttatgtaattgatgaatagacaatcaacttttaacca 4938
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 --aaaaaaaaaatcaaaaatattttatgtaattgatgaatagacaatcaacttttaacca 780
Query: 4939 tggaatctgttatttcttcaagtgtcttcacatt 4972
||||||||||||||||||||||||||||||||||
Sbjct: 781 tggaatctgttatttcttcaagtgtcttcacatt 814
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 536,655
Number of extensions: 23001
Number of successful extensions: 23001
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 22999
Number of HSP's successfully gapped: 1
Length of query: 4972
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4954
Effective length of database: 8,109,745
Effective search space: 40175676730
Effective search space used: 40175676730
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)