BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10616 (UTR included)
(1717 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2789_C1 1511 0.0
>BF14_2789_C1
Length = 794
Score = 1511 bits (762), Expect = 0.0
Identities = 787/794 (99%), Gaps = 1/794 (0%)
Strand = Plus / Plus
Query: 342 attgttttagtgaaaattttggtcgtaaaacttataattaattttaaatggttattaaat 401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 attgttttagtgaaaattttggtcgtaaaacttataattaattttaaatggttattaaat 61
Query: 402 tggtttatcagtatattgaataacgttttggaacattggacctattattttaatttctac 461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tggtttatcagtatattgaataacgttttggaacattggacctattattttaatttctac 121
Query: 462 actttacttatgtgtgttattgttgctttattttattcaatgggtaacgctgcacttaaa 521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 actttacttatgtgtgttattgttgctttattttattcaatgggtaacgctgcacttaaa 181
Query: 522 cagcactatgaaacagcatctaaaacgggggtactacagatatcagactacaaattaaag 581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 cagcactatgaaacagcatctaaaacgggggtactacagatatcagactacaaattaaag 241
Query: 582 gaaattccagatgatgtttttaatttggcagaacagttacgaaacttggatgtgtctaaa 641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gaaattccagatgatgtttttaatttggcagaacagttacgaaacttggatgtgtctaaa 301
Query: 642 aacaaaattactaatatatctgacgctataagcgaattgaaacatttaaaacaactaaat 701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 aacaaaattactaatatatctgacgctataagcgaattgaaacatttaaaacaactaaat 361
Query: 702 ttgtcatctaacatgatacaaattctgccgtcttcagtggaaaatctgaaaaagctagag 761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ttgtcatctaacatgatacaaattctgccgtcttcagtggaaaatctgaaaaagctagag 421
Query: 762 ttattgaatatgtcatttaattcattaacatctcttccacctgcgatttcaagtttaagc 821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ttattgaatatgtcatttaattcattaacatctcttccacctgcgatttcaagtttaagc 481
Query: 822 aatttgaagcaaatatatttgaataataacaagataaaaaaatttcccatggagatatta 881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 aatttgaagcaaatatatttgaataataacaagataaaaaaatttcccatggagatatta 541
Query: 882 ggactccctaaccttgaggttgtggagctttctcataataaaatgacagaagtaccaagt 941
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 542 ggactccctaaccttgaggttgtggagctttctcataataaattgacagaagtaccaagt 601
Query: 942 ggcatgtcaaacttgtttgctgcagaattgaacctgagtcaaaatgagatttctgtttta 1001
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 602 ggcatgtcaaacttgtttgccgcagaattgaacctgagtcaaaatgagatatctgtttta 661
Query: 1002 agtgaagatttaagtcaagcacctcggttaaaaatattgaggttagaggagaactgcctt 1061
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 662 agtgaagatttaagtcaagcacctcggttaaaaatactgaggttagaggagaactgcctt 721
Query: 1062 agtttagatgctattttaccaagcctgttaagggattccaaaattcatacactaaatgta 1121
||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 722 agtttagatgctattttaccaagcctgttaagggatt-caaaattcacacactaaatgta 780
Query: 1122 gacggcaatttatt 1135
|| |||||||||||
Sbjct: 781 gatggcaatttatt 794
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 322,986
Number of extensions: 8398
Number of successful extensions: 8398
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8397
Number of HSP's successfully gapped: 1
Length of query: 1717
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1700
Effective length of database: 8,119,229
Effective search space: 13802689300
Effective search space used: 13802689300
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)