BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10617 (UTR included)
(1816 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01010B2F12 1231 0.0
BF01029B2B10 672 0.0
>BF01010B2F12
Length = 795
Score = 1231 bits (621), Expect = 0.0
Identities = 642/651 (98%)
Strand = Plus / Plus
Query: 475 aattttaaatgtaaaagcacacaaaaatgtccgccttcaacgtggtgttcggttgcgtaa 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 aattttaaatgtaaaagcacacaaaaatgtccgccttcaacgtggtgttcggttgcgtaa 204
Query: 535 tggcacttctaataattttgtttacaattagctctatagctagatattatataaagttta 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 tggcacttctaataattttgtttacaattagctctatagctagatattatataaagttta 264
Query: 595 cactctttattgtgctttcactaatattcgcatcggttcctttgccgctaatgttcttca 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cactctttattgtgctttcactaatattcgcatcggttcctttgccgctaatgttcttca 324
Query: 655 gacccttcagtccaaaaaatgctcttataccagcatatttcttgcgactaacagctcgtt 714
||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 325 gacccttcagtccaaaaaatgctctaataccagcttatttcttgcgactaacagctcgtt 384
Query: 715 tccttgggatccgctggacggttcaaggacttgagaatgtggatgattctcgtggcgctg 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tccttgggatccgctggacggttcaaggacttgagaatgtggatgattctcgtggcgctg 444
Query: 775 tagttttattaaaccatcagagtagtttggatttgtatgtattggcagtgctatggccgc 834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tagttttattaaaccatcagagtagtttggatttgtatgtattggcagtgctatggccgc 504
Query: 835 ttatggagcgatgcacagtggttgccaagcgttctctccagtactccgttcccttcggca 894
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttatggagcgatgcacagtggttgccaagcgttctctccagtactccgttcccttcggca 564
Query: 895 cagccacctggatgtggggaaccgtcttcatagatcgcggtgcacaatccgcccgttctg 954
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cagccacctggatgtggggaaccgtcttcatagatcgcggtgcacaatccgcccgttctg 624
Query: 955 ttctcaacaaacaaactgacgccatcaaatgtcataagcggaaattattactatttcccg 1014
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ttctcaacaaacaaactgacgccatcaaatgtcataagcggaaattattactatttcccg 684
Query: 1015 agggcacgcggcacggaggtgacaagcttctgcccttcaggaagggagcgttccacgtgg 1074
||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 685 agggcacgcggcatggaggtgacaagcttctgcccttcnnnaagggagcgttccacgtgg 744
Query: 1075 ctttaaatgcagaggctccgatccaaccagtcgttgtatcaaaatatcatt 1125
|||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 745 ctttaaatgcagnnnctccgatccaaccagtcgttgtatcaaaatatcatt 795
>BF01029B2B10
Length = 653
Score = 672 bits (339), Expect = 0.0
Identities = 339/339 (100%)
Strand = Plus / Plus
Query: 475 aattttaaatgtaaaagcacacaaaaatgtccgccttcaacgtggtgttcggttgcgtaa 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80 aattttaaatgtaaaagcacacaaaaatgtccgccttcaacgtggtgttcggttgcgtaa 139
Query: 535 tggcacttctaataattttgtttacaattagctctatagctagatattatataaagttta 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 tggcacttctaataattttgtttacaattagctctatagctagatattatataaagttta 199
Query: 595 cactctttattgtgctttcactaatattcgcatcggttcctttgccgctaatgttcttca 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 cactctttattgtgctttcactaatattcgcatcggttcctttgccgctaatgttcttca 259
Query: 655 gacccttcagtccaaaaaatgctcttataccagcatatttcttgcgactaacagctcgtt 714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gacccttcagtccaaaaaatgctcttataccagcatatttcttgcgactaacagctcgtt 319
Query: 715 tccttgggatccgctggacggttcaaggacttgagaatgtggatgattctcgtggcgctg 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tccttgggatccgctggacggttcaaggacttgagaatgtggatgattctcgtggcgctg 379
Query: 775 tagttttattaaaccatcagagtagtttggatttgtatg 813
|||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tagttttattaaaccatcagagtagtttggatttgtatg 418
Score = 113 bits (57), Expect = 1e-24
Identities = 57/57 (100%)
Strand = Plus / Plus
Query: 813 gtattggcagtgctatggccgcttatggagcgatgcacagtggttgccaagcgttct 869
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 gtattggcagtgctatggccgcttatggagcgatgcacagtggttgccaagcgttct 653
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 261,191
Number of extensions: 6171
Number of successful extensions: 6171
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6171
Number of HSP's successfully gapped: 3
Length of query: 1816
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1799
Effective length of database: 8,119,229
Effective search space: 14606492971
Effective search space used: 14606492971
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)