BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10636 (UTR included)
(2722 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1749_C1 1041 0.0
>BF14_1749_C1
Length = 841
Score = 1041 bits (525), Expect = 0.0
Identities = 588/612 (96%), Gaps = 14/612 (2%)
Strand = Plus / Plus
Query: 2125 gcctcataccatggtacaagaccgcggaccacctcgttctgtacccattccccgaataca 2184
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 gcctcataccatggtacaagaccgcggaccacctcgtcctgtacccattccccgaataca 60
Query: 2185 aacacctgcagacggaaacgcgacagaaagacttataatatgaaacaccggcgatatgag 2244
||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 61 aacacctacagccggacacgcgacagaaagacttataatatgaaacaccggcgatacgag 120
Query: 2245 aacgtcaccggttgcaatagagttgatttttgaatgcgctagttggttaggcgcaaccgt 2304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aacgtcaccggttgcaatagagttgatttttgaatgcgctagttggttaggcgcaaccgt 180
Query: 2305 cagtttgtaccgcacagcttcgatcgtatcgtgttcgttttagagtttaaaattgcattt 2364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cagtttgtaccgcacagcttcgatcgtatcgtgttcgttttagagtttaaaattgcattt 240
Query: 2365 agctttaaaatgtgataataagtgccaacacttggtactgaatattattcgaatggcctt 2424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agctttaaaatgtgataataagtgccaacacttggtactgaatattattcgaatggcctt 300
Query: 2425 ggtattgtacggacagtttccggttcgtatattaattagggaatttattatt-------- 2476
||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 301 ggtattgtacggacagtttccggttcgtatattaattagagaatttattattcgataaaa 360
Query: 2477 ------tatgatttcttttctcaaaatatatacaaaaacatgagatacaagtatatatag 2530
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aaaaaccatgatttcttttctcaaaatatatacaaaaacatgagatacaagtatatatag 420
Query: 2531 aaaattctcgaaatgtatgttttatatttgttagattatactattacgtatgttttcaaa 2590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaaattctcgaaatgtatgttttatatttgttagattatactattacgtatgttttcaaa 480
Query: 2591 tgtcacgtgttttattatatatgaaataaaaccagttgagattgtattaatgcacggtga 2650
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 481 tgtcacgtgttttattatatatgaaataaaaccagctgagattgtattaatgcacggtga 540
Query: 2651 ggagttatatttgttataatttcatcagacgtacattcatctcgatcgcatctcacatga 2710
||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 541 ggagttatatttgttataatttcatcaaacgtacattcatctcgatcgcgtctcacatga 600
Query: 2711 ctcccttttgct 2722
||||||||||||
Sbjct: 601 ctcccttttgct 612
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 289,540
Number of extensions: 11650
Number of successful extensions: 11650
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 11648
Number of HSP's successfully gapped: 2
Length of query: 2722
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2705
Effective length of database: 8,119,229
Effective search space: 21962514445
Effective search space used: 21962514445
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)