BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10659 (UTR included)
(1252 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01011B1D11 989 0.0
>BF01011B1D11
Length = 707
Score = 989 bits (499), Expect = 0.0
Identities = 502/503 (99%)
Strand = Plus / Plus
Query: 380 aggggctgtaggtggtgacggtgatgacagcgatgacaaggaaaaggaagaggaagccga 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggggctgtaggtggtgacggtgatgacagcgatgacaaggaaaaggaagaggaagccga 260
Query: 440 acgtgaacgtcaggaggccatccgcgaggccgaggagagacgcaaggagaaacatcgcaa 499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acgtgaacgtcaggaggccatccgcgaggccgaggagagacgcaaggagaaacatcgcaa 320
Query: 500 gatggaggaagagagagagaagatgcgccaagagataagggacaagtacaagattcccaa 559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gatggaggaagagagagagaagatgcgccaagagataagggacaagtacaagattcccaa 380
Query: 560 aaaggaggagatagcggaacaacaacaacaagaaccggacaaccctctgatgaggaagaa 619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaggaggagatagcggaacaacaacaacaagaaccggacaaccctctgatgaggaagaa 440
Query: 620 gaagacgccggaggaactagccgcggaggcggagctcgaggatcaggacgagtttaccaa 679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaagacgccggaggaactagccgcggaggcggagctcgaggatcaggacgagtttaccaa 500
Query: 680 actgaagaacaccatagaaacacaagtgaacgaactcaagtcccagatcgagagcaagtg 739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 actgaagaacaccatagaaacacaagtgaacgaactcaagtcccagatcgagagcaagtg 560
Query: 740 cgtgatgcagtgaacacgcctccaccaatacatgatgtagctgtgcgagtcaccgtcaca 799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cgtgatgcagtgaacacgcctccaccaatacatgatgtagctgtgcgagtcaccgtcaca 620
Query: 800 acccgaaacccgacactcgacactagacacccgacacttaacccccaatacccgacaacc 859
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acccgaaacccgacactcgacactagacacccgacacttaacccccaatacccgacaacc 680
Query: 860 agcccccaacacctgacatccag 882
||||| |||||||||||||||||
Sbjct: 681 agcccgcaacacctgacatccag 703
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 131,921
Number of extensions: 2700
Number of successful extensions: 2700
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 2700
Number of HSP's successfully gapped: 1
Length of query: 1252
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1235
Effective length of database: 8,119,229
Effective search space: 10027247815
Effective search space used: 10027247815
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)