BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10675 (UTR included)
(4315 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01062A2H10 131 1e-29
BF14_335_C2 123 2e-27
BF01043B1E03 84 2e-15
>BF01062A2H10
Length = 798
Score = 131 bits (66), Expect = 1e-29
Identities = 87/94 (92%)
Strand = Plus / Plus
Query: 4176 attatgacaaatgatagtggccaatagttttgcttctttaaattatgacaaatgatttta 4235
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 attatgacaaatgattttggccaatagttttgcttctttaaattatgacaaatgatttta 154
Query: 4236 gccaatagttttgcttctttaaattttgacaaat 4269
|||||||| ||||||||| |||| ||||||||
Sbjct: 155 gccaatagacgtgcttctttgaattatgacaaat 188
Score = 131 bits (66), Expect = 1e-29
Identities = 87/94 (92%)
Strand = Plus / Plus
Query: 4176 attatgacaaatgatagtggccaatagttttgcttctttaaattatgacaaatgatttta 4235
||||||||||||||| |||||||||| |||||||||||||||||||||||||||||
Sbjct: 628 attatgacaaatgattttggccaatagacgtgcttctttaaattatgacaaatgattttg 687
Query: 4236 gccaatagttttgcttctttaaattttgacaaat 4269
||||||||||||||||||||||||| ||||||||
Sbjct: 688 gccaatagttttgcttctttaaattatgacaaat 721
Score = 131 bits (66), Expect = 1e-29
Identities = 87/94 (92%)
Strand = Plus / Plus
Query: 4176 attatgacaaatgatagtggccaatagttttgcttctttaaattatgacaaatgatttta 4235
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 attatgacaaatgattttggccaatagttttgcttctttaaattatgacaaatgatttta 728
Query: 4236 gccaatagttttgcttctttaaattttgacaaat 4269
|||||||| ||||||||| |||| ||||||||
Sbjct: 729 gccaatagacgtgcttctttgaattatgacaaat 762
Score = 123 bits (62), Expect = 2e-27
Identities = 86/94 (91%)
Strand = Plus / Plus
Query: 4176 attatgacaaatgatagtggccaatagttttgcttctttaaattatgacaaatgatttta 4235
|||| |||||||||| |||||||||| |||||||||||||||||||||||||||||
Sbjct: 54 attacgacaaatgattttggccaatagacgtgcttctttaaattatgacaaatgattttg 113
Query: 4236 gccaatagttttgcttctttaaattttgacaaat 4269
||||||||||||||||||||||||| ||||||||
Sbjct: 114 gccaatagttttgcttctttaaattatgacaaat 147
Score = 107 bits (54), Expect = 1e-22
Identities = 84/94 (89%)
Strand = Plus / Plus
Query: 4176 attatgacaaatgatagtggccaatagttttgcttctttaaattatgacaaatgatttta 4235
||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 423 attatgacaaatgattttggccaatagacgtgcttctttaaattatgacaaatgatttta 482
Query: 4236 gccaatagttttgcttctttaaattttgacaaat 4269
|||||||| ||||||||| |||| ||||||||
Sbjct: 483 gccaatagacgtgcttctttgaattatgacaaat 516
Score = 107 bits (54), Expect = 1e-22
Identities = 84/94 (89%)
Strand = Plus / Plus
Query: 4176 attatgacaaatgatagtggccaatagttttgcttctttaaattatgacaaatgatttta 4235
||||||||||||||| |||||||||| |||||||||||||||||||||||||||||
Sbjct: 587 attatgacaaatgattttggccaatagacgtgcttctttaaattatgacaaatgattttg 646
Query: 4236 gccaatagttttgcttctttaaattttgacaaat 4269
|||||||| |||||||||||||| ||||||||
Sbjct: 647 gccaatagacgtgcttctttaaattatgacaaat 680
Score = 99.6 bits (50), Expect = 4e-20
Identities = 83/94 (88%)
Strand = Plus / Plus
Query: 4176 attatgacaaatgatagtggccaatagttttgcttctttaaattatgacaaatgatttta 4235
||||||||||||||| | |||||||| ||||||||| ||||||||||||||||||||
Sbjct: 136 attatgacaaatgattttagccaatagacgtgcttctttgaattatgacaaatgatttta 195
Query: 4236 gccaatagttttgcttctttaaattttgacaaat 4269
|||||||| |||||||||||||| ||||||||
Sbjct: 196 gccaatagacgtgcttctttaaattatgacaaat 229
Score = 99.6 bits (50), Expect = 4e-20
Identities = 83/94 (88%)
Strand = Plus / Plus
Query: 4176 attatgacaaatgatagtggccaatagttttgcttctttaaattatgacaaatgatttta 4235
||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||
Sbjct: 177 attatgacaaatgattttagccaatagacgtgcttctttaaattatgacaaatgatttta 236
Query: 4236 gccaatagttttgcttctttaaattttgacaaat 4269
|||||||| ||||||||| |||| ||||||||
Sbjct: 237 gccaatagacgtgcttctttgaattatgacaaat 270
Score = 91.7 bits (46), Expect = 9e-18
Identities = 82/94 (87%)
Strand = Plus / Plus
Query: 4176 attatgacaaatgatagtggccaatagttttgcttctttaaattatgacaaatgatttta 4235
||||||||||| ||| |||||||||| ||||||||| |||||||||||||||||||
Sbjct: 382 attatgacaaaggattttggccaatagacatgcttctttgaattatgacaaatgattttg 441
Query: 4236 gccaatagttttgcttctttaaattttgacaaat 4269
|||||||| |||||||||||||| ||||||||
Sbjct: 442 gccaatagacgtgcttctttaaattatgacaaat 475
Score = 91.7 bits (46), Expect = 9e-18
Identities = 82/94 (87%)
Strand = Plus / Plus
Query: 4176 attatgacaaatgatagtggccaatagttttgcttctttaaattatgacaaatgatttta 4235
||||||||||| ||| |||||||||| ||||||||| |||||||||||||||||||
Sbjct: 546 attatgacaaaggattttggccaatagacgtgcttctttgaattatgacaaatgattttg 605
Query: 4236 gccaatagttttgcttctttaaattttgacaaat 4269
|||||||| |||||||||||||| ||||||||
Sbjct: 606 gccaatagacgtgcttctttaaattatgacaaat 639
Score = 89.7 bits (45), Expect = 3e-17
Identities = 81/93 (87%)
Strand = Plus / Plus
Query: 4176 attatgacaaatgatagtggccaatagttttgcttctttaaattatgacaaatgatttta 4235
||||||||||||||| | |||||||| ||||||||| ||||||||||||||||||||
Sbjct: 218 attatgacaaatgattttagccaatagacgtgcttctttgaattatgacaaatgatttta 277
Query: 4236 gccaatagttttgcttctttaaattttgacaaa 4268
|||||||| ||||||||| |||| |||||||
Sbjct: 278 gccaatagacgtgcttctttgaattatgacaaa 310
Score = 89.7 bits (45), Expect = 3e-17
Identities = 81/93 (87%)
Strand = Plus / Plus
Query: 4176 attatgacaaatgatagtggccaatagttttgcttctttaaattatgacaaatgatttta 4235
||||||||||| ||| |||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 300 attatgacaaaggattttggccaatagacgtgcttctttgaattatgacaaatgatttta 359
Query: 4236 gccaatagttttgcttctttaaattttgacaaa 4268
|||||||| ||||||||| |||| |||||||
Sbjct: 360 gccaatagacgtgcttctttgaattatgacaaa 392
Score = 83.8 bits (42), Expect = 2e-15
Identities = 81/94 (86%)
Strand = Plus / Plus
Query: 4176 attatgacaaatgatagtggccaatagttttgcttctttaaattatgacaaatgatttta 4235
||||||||||| ||| |||||||||| ||||||||| ||||| |||||||||||||
Sbjct: 13 attatgacaaaggattttggccaatagacgtgcttctttgaattacgacaaatgattttg 72
Query: 4236 gccaatagttttgcttctttaaattttgacaaat 4269
|||||||| |||||||||||||| ||||||||
Sbjct: 73 gccaatagacgtgcttctttaaattatgacaaat 106
Score = 81.8 bits (41), Expect = 8e-15
Identities = 80/93 (86%)
Strand = Plus / Plus
Query: 4176 attatgacaaatgatagtggccaatagttttgcttctttaaattatgacaaatgatttta 4235
||||||||||||||| | |||||||| ||||||||| ||||||||||||||||||||
Sbjct: 464 attatgacaaatgattttagccaatagacgtgcttctttgaattatgacaaatgatttta 523
Query: 4236 gccaatagttttgcttctttaaattttgacaaa 4268
||| |||| ||||||||| |||| |||||||
Sbjct: 524 gcctatagacgtgcttctttgaattatgacaaa 556
Score = 79.8 bits (40), Expect = 3e-14
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 4176 attatgacaaatgatagtggccaatagttttgcttctttaaattatgacaaatgatttta 4235
||||||||||||||| | |||||||| ||||||||| ||||||||||||||||||||
Sbjct: 710 attatgacaaatgattttagccaatagacgtgcttctttgaattatgacaaatgatttta 769
Query: 4236 gccaatag 4243
||||||||
Sbjct: 770 gccaatag 777
Score = 75.8 bits (38), Expect = 5e-13
Identities = 80/94 (85%)
Strand = Plus / Plus
Query: 4176 attatgacaaatgatagtggccaatagttttgcttctttaaattatgacaaatgatttta 4235
||||||||||||||| | |||||||| ||||||||| |||||||||||| ||||||
Sbjct: 259 attatgacaaatgattttagccaatagacgtgcttctttgaattatgacaaaggattttg 318
Query: 4236 gccaatagttttgcttctttaaattttgacaaat 4269
|||||||| ||||||||| |||| ||||||||
Sbjct: 319 gccaatagacgtgcttctttgaattatgacaaat 352
Score = 75.8 bits (38), Expect = 5e-13
Identities = 80/94 (85%)
Strand = Plus / Plus
Query: 4176 attatgacaaatgatagtggccaatagttttgcttctttaaattatgacaaatgatttta 4235
||||||||||||||| | |||||||| ||||||||| |||||||||||| ||||||
Sbjct: 341 attatgacaaatgattttagccaatagacgtgcttctttgaattatgacaaaggattttg 400
Query: 4236 gccaatagttttgcttctttaaattttgacaaat 4269
|||||||| ||||||||| |||| ||||||||
Sbjct: 401 gccaatagacatgcttctttgaattatgacaaat 434
>BF14_335_C2
Length = 1827
Score = 123 bits (62), Expect = 2e-27
Identities = 100/112 (89%), Gaps = 3/112 (2%)
Strand = Plus / Minus
Query: 2275 acttgggcctgtccagaactaacttcagttcattcttggaacgtacttcgaacgctggcc 2334
||||||||||||||||||||||| |||||||||||| |||||||||||||| | | |
Sbjct: 1066 acttgggcctgtccagaactaacaccagttcattcttcgaacgtacttcgaagacagctc 1007
Query: 2335 tagtaggttcgtttcaaatttggtttggtggagagaggagcttggacggtgg 2386
||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1006 tagtaggttcgtttcaaatttggtt---aggagagaggagcttggacggtgg 958
>BF01043B1E03
Length = 830
Score = 83.8 bits (42), Expect = 2e-15
Identities = 95/112 (84%), Gaps = 3/112 (2%)
Strand = Plus / Plus
Query: 2275 acttgggcctgtccagaactaacttcagttcattcttggaacgtacttcgaacgctggcc 2334
||||| ||||| ||||||||||| ||| |||||||||||||||||| | || || ||||
Sbjct: 252 acttgagcctgcccagaactaacatcaaatcattcttggaacgtactgcaaaggcaggcc 311
Query: 2335 tagtaggttcgtttcaaatttggtttggtggagagaggagcttggacggtgg 2386
||| ||| ||||||||||||||| ||| ||||||||| ||||||| ||||
Sbjct: 312 tag---gtttgtttcaaatttggttaggtagagagaggaccttggacagtgg 360
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 367,060
Number of extensions: 7026
Number of successful extensions: 7026
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 7021
Number of HSP's successfully gapped: 19
Length of query: 4315
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4297
Effective length of database: 8,109,745
Effective search space: 34847574265
Effective search space used: 34847574265
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)