BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10680 (UTR included)
(2131 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019B2G07 1265 0.0
>BF01019B2G07
Length = 718
Score = 1265 bits (638), Expect = 0.0
Identities = 702/719 (97%), Gaps = 5/719 (0%)
Strand = Plus / Plus
Query: 1272 tttgggctgtatggatcgtatttcggaccttcggaatatgaagtgcacttacagataatt 1331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttgggctgtatggatcgtatttcggaccttcggaatatgaagtgcacttacagataatt 60
Query: 1332 cacctggccaccaagaaggtgtgcggctccaacacgaccacgttctgttgtgacggctcc 1391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cacctggccaccaagaaggtgtgcggctccaacacgaccacgttctgttgtgacggctcc 120
Query: 1392 gacgacaccttccgcgctatgttcaaggaaccggtcgagatactccctaacacctcgtac 1451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gacgacaccttccgcgctatgttcaaggaaccggtcgagatactccctaacacctcgtac 180
Query: 1452 atagccagcgctaagctcaagggcaccgactcgtactacggtactcgcggcttgaggcga 1511
|||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||
Sbjct: 181 atagccagcgctaaactcaagggcaccgactcgtactacgggactc-cggcttgaggcga 239
Query: 1512 gtcacggctgactgtaacaacggggagaaggtggttttccaattctcatacgcggctgga 1571
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 gtcacagctgactgtaacaacggggagaaggtggttttccaattctcatacgcggctgga 299
Query: 1572 aataacaatgggacctcggtggaagacggacagataccggccatcatattctatatataa 1631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 aataacaatgggacctcggtggaagacggacagataccggccatcatattctatatataa 359
Query: 1632 tacagtattcgaccacatggtcggtctagactagatctcgttagactaaagctccttcac 1691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tacagtattcgaccacatggtcggtctagactagatctcgttagactaaagctccttcac 419
Query: 1692 attagacatgttcccagagagggttttataacgaccgtctgtgtggaaacgcactaatgt 1751
|||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 420 attagacatgttcccagagagggtttcataacaaccgtctgtgtggaaacgcactaatgt 479
Query: 1752 tcctcgctgttttaacatttctatcaactatcatatgttctgtaatgtcatgtgtaatga 1811
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 480 tcctcgctgttttaacatttctatcaactatcatatgttctgtaatgttatgtgtaatga 539
Query: 1812 taactaaattactaataatcataattatatcttgtatgtatattagttgttggacggagt 1871
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 540 taactaaattactaataatcataattatatcttgtatgtatatttgttgttggacggagc 599
Query: 1872 gaatgaaattttaaa-taataccttgtaat--aaaaaaaaaacaatatgtctcatggtct 1928
|||||||| ||||| | ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 600 gaatgaaannttaaagttttaccttgtaataaaaaaaaaaaacaatatgtctcatggtct 659
Query: 1929 ataaatataaatttgaaaaatgattatattatcaa-tttgaaaaaagaaatataaatga 1986
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 660 ataaatataaatttgaaaaatgattatattatcaattttgaaaaaagaaatataaatga 718
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 244,160
Number of extensions: 5273
Number of successful extensions: 5273
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5269
Number of HSP's successfully gapped: 1
Length of query: 2131
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2114
Effective length of database: 8,119,229
Effective search space: 17164050106
Effective search space used: 17164050106
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)