BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10717 (UTR included)
(1975 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1604_C1 1641 0.0
>BF14_1604_C1
Length = 849
Score = 1641 bits (828), Expect = 0.0
Identities = 843/848 (99%)
Strand = Plus / Plus
Query: 464 tttcgtattaactgaaccataactgtgtgcatttaaaatgaagcctcgcccttgtggctg 523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tttcgtattaactgaaccataactgtgtgcatttaaaatgaagcctcgcccttgtggctg 61
Query: 524 taaaggctgcagaacgtgtctcatttgtgaaacttattatggggccgaagaacttaagaa 583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 taaaggctgcagaacgtgtctcatttgtgaaacttattatggggccgaagaacttaagaa 121
Query: 584 tctggtaaagcttgacaaagacaaaggttatgtattttgcccattctgtaacaaagcttg 643
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 122 tctggtaaagcttgacaaagacaaaggttatgtattttgcccattttgtaacaaagcttg 181
Query: 644 gagtggctgggatatagacgtatataaacaacatccatatcacgagggcgaatcgattga 703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gagtggctgggatatagacgtatataaacaacatccatatcacgagggcgaatcgattga 241
Query: 704 ctacccaggtgtttatataaaattagattttatatctgaatatgaagaaacagaactaat 763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ctacccaggtgtttatataaaattagattttatatctgaatatgaagaaacagaactaat 301
Query: 764 gagaaacatagatgaagtgccgtgggatatatcgcagagcggccggcgtaaacagaacta 823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gagaaacatagatgaagtgccgtgggatatatcgcagagcggccggcgtaaacagaacta 361
Query: 824 tggaccaaaaactaattttaaaaagaaaaaaatcgttcctggacaattcaatgggtttcc 883
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tggaccaaaaactaattttaaaaagaaaaaaatcgttcctggacaattcaatgggtttcc 421
Query: 884 taagttttcccagtatttgcaggacagattcaaaactttcgatatattaaaaggttatga 943
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 taagttttcccagtatttgcaggacagattcaaaactttcgatatattaaaaggttatga 481
Query: 944 agtcattgagcagtgttctcttgagtatgatcctatgaagggggcgtctattgaccctca 1003
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 agtcattgagcagtgttctcttgagtatgatcctatgaagggggcgtctattgaccctca 541
Query: 1004 tatcgatgactgctgggtctggggtgagagaatactcacagttaactgtttgtcagactc 1063
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 542 tatcgatgactgctgggtctggggtgagagaatacttacagttaactgtttgtcagactc 601
Query: 1064 cgttcttacaatgactccattcaaaggcgacacaataaagtataatctatattgtgcaaa 1123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 cgttcttacaatgactccattcaaaggcgacacaataaagtataatctatattgtgcaaa 661
Query: 1124 ggagtatcctcctgttgtccaggacgatggcactgtcgatatggattttacgagcaaaca 1183
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 662 ggagtatcctcctgttgtccaggacgatggcactatcgatatggattttacgagcaaaca 721
Query: 1184 aaacatgtttgaagctagtaaaccaaaagaggatttagatgtaataataaggattccgtt 1243
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 722 aaacatgtttgaagctagtaaaccaaaagaggatgtagatgtaataataaggattccgtt 781
Query: 1244 gataaggcgatctctactaataatctacggtgaatcgaggtaccattgggagcaccgggt 1303
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 782 gataaggcgatctctactaataatctacggtgaatcgagataccattgggagcaccgggt 841
Query: 1304 tttacgtg 1311
||||||||
Sbjct: 842 tttacgtg 849
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 366,369
Number of extensions: 18835
Number of successful extensions: 18835
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 18835
Number of HSP's successfully gapped: 1
Length of query: 1975
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1958
Effective length of database: 8,119,229
Effective search space: 15897450382
Effective search space used: 15897450382
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)