BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10718 (UTR included)
(1720 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_591_C1 2305 0.0
>BF14_591_C1
Length = 1276
Score = 2305 bits (1163), Expect = 0.0
Identities = 1180/1185 (99%), Gaps = 2/1185 (0%)
Strand = Plus / Plus
Query: 463 gattttatatttagaatagaagaagtgttattttaaaaatggctatcggtgcagggatgt 522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 gattttatatttagaatagaagaagtgttattttaaaaatggctatcggtgcagggatgt 151
Query: 523 cttgcgtgaaatacttgttattctcgtttaatcttttgtttgcgattacaggactaataa 582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 cttgcgtgaaatacttgttattctcgtttaatcttttgtttgcgattacaggactaataa 211
Query: 583 ttcttattgttggtgccaagtccgagatcaatgcacatccatatgttgatctcacagatg 642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 ttcttattgttggtgccaagtccgagatcaatgcacatccatatgttgatctcacagatg 271
Query: 643 aaagtttctacacctcggcccccgtgatcctgatcatagtgggtttgattgtgttcgtgg 702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 aaagtttctacacctcggcccccgtgatcctgatcatagtgggtttgattgtgttcgtgg 331
Query: 703 tcgctttcttcggttgctgtggtgcggtcaaggagaaccattgcatgatagttacgttct 762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tcgctttcttcggttgctgtggtgcggtcaaggagaaccattgcatgatagttacgttct 391
Query: 763 cggtgttcctgctgatgatattcatagcggagatggcggtcggcatcgccggttacgtga 822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 cggtgttcctgctgatgatattcatagcggagatggcggtcggcatcgccggttacgtga 451
Query: 823 agcacaaggacttggagacgtccatcgtccgcaccctgaacgagtccataacgcactact 882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 agcacaaggacttggagacgtccatcgtccgcaccctgaacgagtccataacgcactact 511
Query: 883 ccacagaccctgacgttcagaagaactacgacatcatacagaccgacatgcactgctgtg 942
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 512 ccacagaccctgacgttcagaagaactacgacatcatacagaccgacatgcactgctgcg 571
Query: 943 gtatatacggctacgaagactgggcgcacaccaaccagtccctccccaccacgtgctgcg 1002
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 gtatatacggctacgaagactgggcgcacaccaaccagtccctccccaccacgtgctgcg 631
Query: 1003 gcgcccacgagctggtggagggcagtgctgtggcctgcaccgtgtcatcgccaggactct 1062
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 gcgcccacgagctggtggagggcagtgctgtggcctgcaccgtgtcatcgccaggactct 691
Query: 1063 acaccaggggctgtctccctctcatactggtgaagcttcaggacatagcgctcgtgctgg 1122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 acaccaggggctgtctccctctcatactggtgaagcttcaggacatagcgctcgtgctgg 751
Query: 1123 gtggagttggactcgggatagcctttgttcagttgctcggcgtgatattcgcctgctgcc 1182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 gtggagttggactcgggatagcctttgttcagttgctcggcgtgatattcgcctgctgcc 811
Query: 1183 tcgctcgctccatccgcagtcagtacgagacagtataaaacaagaaactagtttccacaa 1242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 tcgctcgctccatccgcagtcagtacgagacagtataaaacaagaaactagtttccacaa 871
Query: 1243 accctctacaactcatattcatattaagtgaaagtataagattaccatttatttttttat 1302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 872 accctctacaactcatattcatattaagtgaaagtataagattaccatttatttttttat 931
Query: 1303 gttattttaaattgatttacgaattcattgttttacttttc--ttaatgtaattatgtat 1360
||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 932 gttattttaaattgatttacgaattcattgttttacttttcttttaatataattatgtat 991
Query: 1361 attttgaacgtcggatgtatgtatagtatcaatagatggcgctggcacaaacgttctaga 1420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 992 attttgaacgtcggatgtatgtatagtatcaatagatggcgctggcacaaacgttctaga 1051
Query: 1421 atggtccgtcgggagctcggcgtagaagactgatgtatcgaatagttgatttctaatggc 1480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1052 atggtccgtcgggagctcggcgtagaagactgatgtatcgaatagttgatttctaatggc 1111
Query: 1481 caagtgattttatataatgcacttcacacattatctgaatgtcaatacttaaaagtaata 1540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1112 caagtgattttatataatgcacttcacacattatctgaatgtcaatacttaaaagtanta 1171
Query: 1541 ttttaagtagcgtctagattgtttctcgatgtctgtagtgctgcaccggttatgactcgg 1600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1172 ttttaagtagcgtctagattgtttctcgatgtctgtagtgctgcaccggttatgactcgg 1231
Query: 1601 atagttactaagaaatgctttgtccttacaaagatactatttgtg 1645
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1232 atagttactaagaaatgctttgtccttacaaagatactatttgtg 1276
Score = 127 bits (64), Expect = 6e-29
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 208 ccggggtggaaacgacgtagaaactataacactgctgttgtgtttattatcttataagta 267
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25 ccggggtgaaaacgacgtagaaactataacactgctgttgtgtttattatcttataagta 84
Query: 268 atttggcg 275
||||||||
Sbjct: 85 atttggcg 92
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 219,352
Number of extensions: 4726
Number of successful extensions: 4726
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4723
Number of HSP's successfully gapped: 2
Length of query: 1720
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1703
Effective length of database: 8,119,229
Effective search space: 13827046987
Effective search space used: 13827046987
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)