BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10723 (UTR included)
(1939 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01034B1F06 1580 0.0
>BF01034B1F06
Length = 821
Score = 1580 bits (797), Expect = 0.0
Identities = 815/821 (99%)
Strand = Plus / Plus
Query: 455 taacgatacaaaattgcttattattaatatgaaataattatttgtgatgtcgcagttggg 514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taacgatacaaaattgcttattattaatatgaaataattatttgtgatgtcgcagttggg 60
Query: 515 ggcgttgtcaaacggatgggcaattgacactccgcctgttgacctgagaaatgataacga 574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggcgttgtcaaacggatgggcaattgacactccgcctgttgacctgagaaatgataacga 120
Query: 575 atatcacccggtcttcaaagcgtttctggcgggatcgttttcaggaactttcagcacaat 634
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 121 atatcacccggtcttcaaagcgtttctggcgggatcgttttcaggaacttttagcacaat 180
Query: 635 cctcttccaaccattggatttagtcaagacaagactccaaaaccccagccaacatgttgt 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cctcttccaaccattggatttagtcaagacaagactccaaaaccccagccaacatgttgt 240
Query: 695 ggcggcgacggtcaacagccgaatccaacccggcatgatcacaatcttcgtaaacatcgt 754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggcggcgacggtcaacagccgaatccaacccggcatgatcacaatcttcgtaaacatcgt 300
Query: 755 acgtcaggaacaaatagttggtctttggagaggaatggtgccttcgatcgcgagatgcgt 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acgtcaggaacaaatagttggtctttggagaggaatggtgccttcgatcgcgagatgcgt 360
Query: 815 accgggcgtcgggttgtacttctcatcccttcactggctaaagtctaaactaggaaagac 874
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 accgggcgtcgggttgtacttctcatcccttcactggctaaagtctaaactaggaaagac 420
Query: 875 taaacaggacttaggcgctatggaagcggttggattgggggtagtggctaggactatgag 934
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 taaacaggacttaggcgctatggaagcggttggattgggggtagtggctaggactatgag 480
Query: 935 cggcgtcgctttaatacctatgacagttatcaaaacaagatacgaatctggagtatacaa 994
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cggcgtcgctttaatacctatgacagttatcaaaacaagatacgaatctggagtatacaa 540
Query: 995 atacaatggtctccggagcgccttaaaatcaatttacaaagcagagggaatcagaggatt 1054
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 atacaatggtctccggagcgccttaaaatcaatttacaaagcagagggaatcagaggatt 600
Query: 1055 atcctgtgggcttggaccaactctggctagagatgcacctttttctgggctatatctcat 1114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 atcctgtgggcttggaccaactctggctagagatgcacctttttctgggctatatctcat 660
Query: 1115 gttctatacacaaaccaaacaagccatgcctaaagaatggatgtcgaccccagcagcggc 1174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gttctatacacaaaccaaacaagccatgcctaaagaatggatgtcgaccccagcagcggc 720
Query: 1175 atcaatgatacatttctcatgtggtatcgtagctggcatagcggcttcactcgccactaa 1234
|||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 721 atcaatgatacatttctcgtgtggtatcgtagctggtatagcggcatcactcgccactaa 780
Query: 1235 cccggccgatgtactcaagaccaaaatgcagttgtacccag 1275
||||||||||||||||||||||||||||||| | |||||||
Sbjct: 781 cccggccgatgtactcaagaccaaaatgcagctatacccag 821
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 299,337
Number of extensions: 7342
Number of successful extensions: 7342
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7342
Number of HSP's successfully gapped: 1
Length of query: 1939
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1922
Effective length of database: 8,119,229
Effective search space: 15605158138
Effective search space used: 15605158138
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)