BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10732 (UTR included)
(2080 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_729_C3 141 5e-33
BF01011A1H06 74 1e-12
>BF14_729_C3
Length = 2041
Score = 141 bits (71), Expect = 5e-33
Identities = 116/131 (88%), Gaps = 1/131 (0%)
Strand = Plus / Minus
Query: 658 gtttcggtaactttgcagcgaccatgatcacggacagacgagatattaatgtctgtcagt 717
|||||||| |||||||||| ||| ||||||||| |||||||| | | |||||||||||||
Sbjct: 1630 gtttcggttactttgcagcaaccgtgatcacgggcagacgaggtgtgaatgtctgtcagt 1571
Query: 718 tggtc-ttgttatttagcatctaccgccatcgatttcttaattttctggcgtcccgctct 776
||||| |||||||||| ||||||||||||||||||||||||| |||||| |||||||
Sbjct: 1570 tggtccttgttatttatcatctaccgccatcgatttcttaatnnnntggcgtaccgctct 1511
Query: 777 ggatgctggca 787
|||||| ||||
Sbjct: 1510 ggatgccggca 1500
>BF01011A1H06
Length = 739
Score = 73.8 bits (37), Expect = 1e-12
Identities = 83/97 (85%), Gaps = 1/97 (1%)
Strand = Plus / Minus
Query: 658 gtttcggtaactttgcagcgaccatgatcacggacagacgagatattaatgtctgtcagt 717
|||||||| ||||| ||| ||| ||||||||| |||||||||| | | |||||||||||
Sbjct: 502 gtttcggttacttttcagtaaccgtgatcacgggcagacgagatgtgagtgtctgtcagt 443
Query: 718 tggt-cttgttatttagcatctaccgccatcgatttc 753
|||| ||||||||| | || || ||||||||||||||
Sbjct: 442 tggtccttgttattcatcaactgccgccatcgatttc 406
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 257,122
Number of extensions: 5743
Number of successful extensions: 5743
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5741
Number of HSP's successfully gapped: 2
Length of query: 2080
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2063
Effective length of database: 8,119,229
Effective search space: 16749969427
Effective search space used: 16749969427
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)