BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10763 (UTR included)
(1634 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01031A1A11 1080 0.0
>BF01031A1A11
Length = 617
Score = 1080 bits (545), Expect = 0.0
Identities = 603/620 (97%), Gaps = 3/620 (0%)
Strand = Plus / Plus
Query: 945 cagtggagacatcttcgacgattccttcgtcatagaagagaagaaagcgaggccgagaag 1004
|||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||| ||
Sbjct: 1 cagtggagacatcttcgacgattccttcatcatagaatagaagaaagtgaggccgaggag 60
Query: 1005 gaaactgatatcagacgaggaggtcatcgtgaagagagtggtcaggaagaaagttacaag 1064
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 61 gaaactgatatcagacgaggaggtcatcgtaaagagagtggtcaggaagaaagttacaag 120
Query: 1065 tgtcacacacaagaccaggtcgtggagggactctcccgccgtcatgaacggacggtcacc 1124
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgtcacacataagaccaggtcgtggagggactctcccgccgtcatgaacggacggtcacc 180
Query: 1125 gcccaagtaacccacatcacaatacagctgccatagactggaatgtcccaagccatacac 1184
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 181 gcccaagtaaccgacatcacaatacagctgccatagactggagtgtcccaagccatacac 240
Query: 1185 agctcccaccaaacaataacacaataataatagacttaaaatatacaataattcaacgcc 1244
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct: 241 agctcccaccaaacaataacacaataataatagacttaaaatatccaataattcaacgtc 300
Query: 1245 atatatttttactctcacttgaaacattgatgtagttcattatgtttataaagaatcgtt 1304
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 301 atatatttttactctcacttgaaacattgatgtagttaattatgtttataaagaatcgtt 360
Query: 1305 aagtaagtatcgatattcatatgggtcgatgtttttaattaagtttccttgtattgttag 1364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aagtaagtatcgatattcatatgggtcgatgtttttaattaagtttccttgtattgttag 420
Query: 1365 agggaaaagactacttgaatagctaacgaggttaggatattagagaacattaatattaaa 1424
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 421 agggaaaagactacttgaatagctaacgaggtcaggatattagagaacattaatattaaa 480
Query: 1425 tatgtcgtctgtggacaagtgaactcttaaacattttgtatctgctgagtcagtgtggca 1484
||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||
Sbjct: 481 aatgtcgtctgtggacaagtgatctcttaaacattttgtatctgctgagt-agtgtggca 539
Query: 1485 tcgagtgtccgttgtcagctggtagcgtactgagagcagtcgcttataacatgtacttag 1544
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 540 tcgagtgtccgttgtcagctggtagcgtact--gagcagtcgcttataacatgtacttag 597
Query: 1545 aaccagttgttgttctttat 1564
||||||||||||||||||||
Sbjct: 598 aaccagttgttgttctttat 617
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 170,227
Number of extensions: 3096
Number of successful extensions: 3096
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3094
Number of HSP's successfully gapped: 1
Length of query: 1634
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1617
Effective length of database: 8,119,229
Effective search space: 13128793293
Effective search space used: 13128793293
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)