BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10781 (UTR included)
(2104 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2033_C1 1602 0.0
BF01056B2B05 307 4e-83
BF14_673_C1 74 1e-12
>BF14_2033_C1
Length = 848
Score = 1602 bits (808), Expect = 0.0
Identities = 838/848 (98%)
Strand = Plus / Plus
Query: 257 cttaaaccttcttcttgccgtttactcggttctaacaccatattttacagaaatttatat 316
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1 cttaaaccttcttcttgccgtttactcggttctaacaccatattttacagaaatatatat 60
Query: 317 cattaatattatcatattagtccaaaaaggctttgaataagcctaataagagtgctatca 376
||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 61 cattaatatcatcatattagtccaaaaaggctttgaataagcctaataagagtgccatca 120
Query: 377 tttatttcccacttgtaatattacaactgtaaaaatggcgttaaaatcgtcagtgctttt 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tttatttcccacttgtaatattacaactgtaaaaatggcgttaaaatcgtcagtgctttt 180
Query: 437 aaatgggctttttgcaagactttcccggcgaaacttttcaacatcaaagacattatcagc 496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaatgggctttttgcaagactttcccggcgaaacttttcaacatcaaagacattatcagc 240
Query: 497 gaacatggtccctgttcgtgatgctttaaaacaggcaattgatgaagaaatggagagaga 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaacatggtccctgttcgtgatgctttaaaacaggcaattgatgaagaaatggagagaga 300
Query: 557 cgaaaaagtgttcattctaggtgaagaagtagcccaatacgacggcgcatacaaagttac 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cgaaaaagtgttcattctaggtgaagaagtagcccaatacgacggcgcatacaaagttac 360
Query: 617 cagaggtctttggaagaagtatggggataagagggtagtagacactccgatcacagagat 676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cagaggtctttggaagaagtatggggataagagggtagtagacactccgatcacagagat 420
Query: 677 tggctttgcaggtatcgcagtcggagctgccttcgctggtctccggcctatctgtgaatt 736
||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 421 tggctttgcaggtatcgcagtcggagctgcctttgctggtctgcggcctatctgtgaatt 480
Query: 737 catgacattcaatttcgccatgcaggccatagatcacataataaattcggcggccaagac 796
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 481 catgacattcaatttcgccatgcaggccatagatcacataataaactcggcggccaagac 540
Query: 797 attctacatgtcagccggggctgtacccgttccgatagtgttcaggggaccgaacggagc 856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 attctacatgtcagccggggctgtacccgttccgatagtgttcaggggaccgaacggagc 600
Query: 857 ggcggcgggagtggcggcgcagcactcgcaatgcttcgcagcttggtacagcagtgtacc 916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 601 ggcggcgggagtggcggcgcagcactcgcaatgcttcgcagcttggtacagcagtgtgcc 660
Query: 917 cggcctgaaggtgctcatgccgtactcctcggaagacgccaaaggtctgttgaaggctgc 976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cggcctgaaggtgctcatgccgtactcctcggaagacgccaaaggtctgttgaaggctgc 720
Query: 977 tatccgggaccccgatccagtagtgttcctggaggatgagattgtctacggtgtgccctt 1036
|||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 721 tatccgagaccccgatccagtagtgttcctggaggatgagatcgtctacggtgtgccctt 780
Query: 1037 ccccatgtcagatgaggccatgtcgcctgatttcgtactacccattggtaaagcgaaagt 1096
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 781 ccccatgtcagatgaggccatgtcgcctgatttcgtactacccattggtaaagcgaaggt 840
Query: 1097 ggagagag 1104
||||||||
Sbjct: 841 ggagagag 848
>BF01056B2B05
Length = 246
Score = 307 bits (155), Expect = 4e-83
Identities = 158/159 (99%)
Strand = Plus / Plus
Query: 1484 cagtgagtcagggaagcggcgcctctacctgtccgaggatattgtaaatatttatgttta 1543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 cagtgagtcagggaagcggcgcctctacctgtccgaggatattgtaaatatttatgttta 124
Query: 1544 tatttatttatatatgaacgagcgtctcacagactcctgtcgctgtcatggacatagata 1603
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 125 tatttatttatatatgaacgatcgtctcacagactcctgtcgctgtcatggacatagata 184
Query: 1604 attattaatcatgtacaataaatgtgtaactctttgtac 1642
|||||||||||||||||||||||||||||||||||||||
Sbjct: 185 attattaatcatgtacaataaatgtgtaactctttgtac 223
Score = 75.8 bits (38), Expect = 3e-13
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 1445 cggggacgtggtcgccgccgtcgccgctgtactagggaacag 1486
||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1 cggggacgtggtcgccgccgtcgccgctgtactggggaacag 42
>BF14_673_C1
Length = 1197
Score = 73.8 bits (37), Expect = 1e-12
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 1824 aacataagggatgttgcgcatgcgttgccaaccttgattgtggaagagggagagggaaag 1883
|||||||||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||||
Sbjct: 991 aacataagggatgttgcggatgcgttgccgaccttggttgtgggagaggaagaggaaaag 1050
Query: 1884 g 1884
|
Sbjct: 1051 g 1051
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 241,553
Number of extensions: 5060
Number of successful extensions: 5060
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 5060
Number of HSP's successfully gapped: 4
Length of query: 2104
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2087
Effective length of database: 8,119,229
Effective search space: 16944830923
Effective search space used: 16944830923
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)