BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10796 (UTR included)
(1759 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3456_C1 1707 0.0
>BF14_3456_C1
Length = 1066
Score = 1707 bits (861), Expect = 0.0
Identities = 921/944 (97%)
Strand = Plus / Plus
Query: 1 acccatgaaattgtgtaaactttacggtacctggtgtcaggtacctacaaatttcaattt 60
||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||| ||
Sbjct: 123 acccatgaaattgagtaaactttacggtacctggtggcaggtacctacaaattacaactt 182
Query: 61 tgatttgacccaggtcatggatgaaaataatgattaaaaaagattgtgtcaaattggaat 120
|| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 183 tgttttgacccaggtcatggatgaaaataatgattaaaaaggattgtgtcaaattggaat 242
Query: 121 tatattttttattaaaatattacttcataatatacgtatgaactggttatgaaaaacatt 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 tatattttatattaaaatattacttcataatatacgtatgaactggttatgaaaaacatt 302
Query: 181 gataatcgttctttttattagtgttgtttataaaccttaagttaataaattgttaaagtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 gataatcgttctttttattagtgttgtttataaaccttaagttaataaattgttaaagtt 362
Query: 241 aaaacgtctgtagtacacagtcttgttctatagatagtaattaatatatgtaggtagtga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 aaaacgtctgtagtacacagtcttgttctatagatagtaattaatatatgtaggtagtga 422
Query: 301 aatacaatttgtacctcattttaatttatcttgtgctgtaataaaaattcaaaatgatgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 aatacaatttgtacctcattttaatttatcttgtgctgtaataaaaattcaaaatgatgt 482
Query: 361 gtctaaataaaactcttaataaagtaaatacacccattctaacatggggaaatccatttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 gtctaaataaaactcttaataaagtaaatacacccattctaacatggggaaatccatttg 542
Query: 421 aagcgaatgggaaagaagttattttttgtgtaacaggaaatccaggtatttcagattttt 480
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 aagcgaatggaaaagaagttattttttgtgtaacaggaaatccaggtatttcagattttt 602
Query: 481 acattgaatttgctgaagagatgcataaaactttaaatttacctgttattgttgtaggtc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 acattgaatttgctgaagagatgcataaaactttaaatttacctgttattgttgtaggtc 662
Query: 541 aagctggtcacgagttttcccttgataatgatgccattacagaaaaaaacaaagacttat 600
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 663 aagctggtcacgagttttcccttgataatgaagccattacagaaaaaaacaaagacttat 722
Query: 601 acaatttacaaggacagttgaagcacaaattagacttgatagagaactatgtggacaaaa 660
||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 723 acaatttacaaggacagttgaagcacaaattagacttaatagagaactacgtggacaaaa 782
Query: 661 aaagtaaatttcattttattggtcactccattggttcttggatgatagtagaattgttac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 aaagtaaatttcattttattggtcactccattggttcttggatgatagtagaattgttac 842
Query: 721 ataataataatgacattttaaacagagtttccactgttaatttattatttccaactctac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 843 ataataataatgacattttaaacagagtttccactgttaatttattatttccaactctac 902
Query: 781 aaaatatggcggaaacaaaaaatggaagatttataaacggttttgttaggcggatgcact 840
|||||||||| |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 903 aaaatatggcannnncaaaaaatggaagatttataaatggttttgttaggcggatgcact 962
Query: 841 gtgttatactattcctgtgtcagatattaagtttatttccaaattttcttataaatttct 900
||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 963 gtgttatactattcctgtgtcagnnattaagtttatttccaaatnnncttataaatttct 1022
Query: 901 tgttaaacatatatcttatgctacattcactacctttgttctat 944
||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1023 tgttaaacatatatcttatgctacattcactacctttattctat 1066
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 307,115
Number of extensions: 7406
Number of successful extensions: 7406
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7405
Number of HSP's successfully gapped: 1
Length of query: 1759
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1742
Effective length of database: 8,119,229
Effective search space: 14143696918
Effective search space used: 14143696918
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)