BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10797 (UTR included)
(4734 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01024A1C10 1285 0.0
BF01016B1C12 295 3e-79
>BF01024A1C10
Length = 716
Score = 1285 bits (648), Expect = 0.0
Identities = 690/704 (98%)
Strand = Plus / Plus
Query: 3568 tcagtaagctaagtacaaagcgcgtaaacgaatcgcaaatagatcaaaactatattaaaa 3627
|||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 13 tcagtaagctaagtacgaagcgcgtaaacgaatcgcagatagatcaaaactatattaaaa 72
Query: 3628 cacgcaagcgcggtctgtctaagaccgtccaagtagcggaaaaattccgcacaaagacga 3687
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 cacgcaagcgcggtctgtctaagaccgtccaagtagcggaaaaattccgcacaaagacgg 132
Query: 3688 ttggagacgtgcaagttatatcacgagctttgtttgggaagaaactttgtgtgttgtcgg 3747
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 tcggagacgtgcaagttatatcacgagctttgtttgggaagaaactttgtgtgttgtcgg 192
Query: 3748 atgacgaggattgtaagaaaacggaattgaaacgcgtcatagagtcccacggagggagac 3807
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 193 atgacgaggattgtaagaaaacagaattgaaacgcgtcatagagtcccacggagggagac 252
Query: 3808 acgttgagaacccaggttcagatacttggtgctgtgtagtgggaactataacaccgcgag 3867
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 253 acgttgagaacccaggttcagatacttggtgctgtgtagtgggaactatgacaccgcgat 312
Query: 3868 cccgtagactcatagagacacaagacctagacatcattagcacagcctggctcagaagcc 3927
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 cccgtagactcatagagacacaagacctagacatcattagcacagcctggctcagaagcc 372
Query: 3928 taccagcgacagacgacccgtgtcaactgtcgccattggacatgctatcaatcaaacccg 3987
|||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 373 taccagcgacagacgaaccgtgtcacctgtcgccattggacatgctatcaatgaaacccg 432
Query: 3988 aaacgaagctcaaactgagcctagactacgaccccttcggtgatagttacaaggatgaaa 4047
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 aaacgaagctcaaactgagcctagactacgaccccttcggtgatagttacaaggatgaaa 492
Query: 4048 tagatgaaaaaacattgaagaaactgctggacaaaatggattcggagttcccgttgtatc 4107
||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 493 tagatgaaaaaacattgaagaaactgctggaaaaaatggattcggagctcccgttgtatc 552
Query: 4108 caactttaaaagaaaaagtctgtctggataaacaattattcggcgccaacaatccttact 4167
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 553 caactttaaaagaaaaagtctgtctggacaaacaattattcggcgccaacaatccttact 612
Query: 4168 catttttgaggaattgtttcattcacgttattgacaattcgctttacgaaactatggcgt 4227
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 cgtttttgaggaattgtttcattcacgttattgacaattcgctttacgaaactatggcgt 672
Query: 4228 cctttttcggagccaaaatctgttctctcgatgacgtcagactg 4271
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 cctttttcggagccaaaatctgttctctcgatgacgtcagactg 716
>BF01016B1C12
Length = 710
Score = 295 bits (149), Expect = 3e-79
Identities = 161/165 (97%)
Strand = Plus / Plus
Query: 3821 aggttcagatacttggtgctgtgtagtgggaactataacaccgcgagcccgtagactcat 3880
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 546 aggttcagatacttggtgctgtgtagtgggaactataacaccgcgatcccgtagactcat 605
Query: 3881 agagacacaagacctagacatcattagcacagcctggctcagaagcctaccagcgacaga 3940
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 agagacacaaaacctagacatcattagcacagcctggctcagaagcctaccagcgacaga 665
Query: 3941 cgacccgtgtcaactgtcgccattggacatgctatcaatcaaacc 3985
|||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 666 cgacccgtgtcacctgtcgccattggacatgctatcaatgaaacc 710
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 558,439
Number of extensions: 10342
Number of successful extensions: 10342
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 10342
Number of HSP's successfully gapped: 2
Length of query: 4734
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4716
Effective length of database: 8,109,745
Effective search space: 38245557420
Effective search space used: 38245557420
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)