BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10812 (UTR included)
(2248 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_574_C1 1681 0.0
>BF14_574_C1
Length = 869
Score = 1681 bits (848), Expect = 0.0
Identities = 863/869 (99%)
Strand = Plus / Plus
Query: 459 tagtgcagttaattcgttaaatactcttaataacattgaataatggaagaaattggtatt 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tagtgcagttaattcgttaaatactcttaataacattgaataatggaagaaattggtatt 60
Query: 519 attctcccagaaaaggatgaccaagtcaccgacacaaaaggcctatcatttgcaggtcca 578
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 61 attctcccagaaaaggatgaccaagtcaccgacacaaaaggtctatcatttgcaggtcca 120
Query: 579 caatcttttgacgaattggaatctgaagatctgtacacaaaatacaagaaattacaacga 638
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 121 caatcttttgacgaattggaatctgaagatctgtacacaaaatacaagaaactacaacga 180
Query: 639 atgttagagtttctcgaagtacaagaagattacataaaagatgaacaaagaaatttaaag 698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atgttagagtttctcgaagtacaagaagattacataaaagatgaacaaagaaatttaaag 240
Query: 699 aaggaatatttgcatgcccaagaagaggtaaaaaggattcagtctgtacctctggtcata 758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaggaatatttgcatgcccaagaagaggtaaaaaggattcagtctgtacctctggtcata 300
Query: 759 ggacagttcctcgaagcagttgatcaaaatactggaattgttggtagcacaacaggatca 818
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggacagttcctcgaagcagttgatcaaaatactggaattgttggtagcacaacaggatca 360
Query: 819 aattattatgtgcgaatcctgtctacaatagaccgagagcttctaaagccatctgcctcc 878
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aattattatgtgcgaatcctatctacaatagaccgagagcttctaaagccatctgcctcc 420
Query: 879 gtcgctctacataagcactccaatgctcttgtagatgtgcttccaccagaagctgatagt 938
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtcgctctacataagcactccaatgctcttgtagatgtgcttccaccagaagctgatagt 480
Query: 939 tccatatctatgttacaagctgacgaaaagccagatgttcagtactcagatatcggagga 998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tccatatctatgttacaagctgacgaaaagccagatgttcagtactcagatatcggagga 540
Query: 999 atggatacacagaaacaggaaatcagagaggctgttgaactgcctttgacacatgtggaa 1058
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 atggatacacagaaacaggaaatcagagaggctgttgaactgcctttgacacatgtggaa 600
Query: 1059 ctttaccgacagatcggtattgaaccccctcgtggtgtactcatgtacggacctccgggt 1118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ctttaccgacagatcggtattgaaccccctcgtggtgtactcatgtacggacctccgggt 660
Query: 1119 tgcggcaaaactatgttggccaaagctgttgctcatcatacaactgctgctttcattcgt 1178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tgcggcaaaactatgttggccaaagctgttgctcatcatacaactgctgctttcattcgt 720
Query: 1179 gttgtggggtctgagttcgtgcagaagtacctcggcgaaggtccacggatggttcgtgat 1238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gttgtggggtctgagttcgtgcagaagtacctcggcgaaggtccacggatggttcgtgat 780
Query: 1239 gtgttccgtctcgccaaagaaaatagtccagctatcatatttatagatgagattgacgct 1298
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gtgttccgtctcgcnnnagaaaatagtccagctatcatatttatagatgagattgacgct 840
Query: 1299 atcgccaccaaaagatttgatgcccaaac 1327
|||||||||||||||||||||||||||||
Sbjct: 841 atcgccaccaaaagatttgatgcccaaac 869
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 297,560
Number of extensions: 6313
Number of successful extensions: 6313
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6313
Number of HSP's successfully gapped: 1
Length of query: 2248
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2231
Effective length of database: 8,119,229
Effective search space: 18113999899
Effective search space used: 18113999899
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)