BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10828 (UTR included)
(2386 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01028B2H10 1413 0.0
>BF01028B2H10
Length = 736
Score = 1413 bits (713), Expect = 0.0
Identities = 725/729 (99%)
Strand = Plus / Plus
Query: 514 gtactcccactgtaagtttagtatcatgtatgcattttgtgagacggggaatagcgaaac 573
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 8 gtactcccactgtaagtttagtatcatgtatgcattttgtgagacgtggaatagcgaaac 67
Query: 574 cagtgccagaaaagattgaattgacagaaaatgaattagaaaaaattataaagcagactg 633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 cagtgccagaaaagattgaattgacagaaaatgaattagaaaaaattataaagcagactg 127
Query: 634 ctgaagatcttcgtttaacagaagcaggagatgatcaaagtggagaagaagatgaagctg 693
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 128 ctgaagatcttcgtttaacagaagcaggagacgatcaaagtggagaagaagatgaagctg 187
Query: 694 cacagagtatcagggagcctccagcaaaccccaatgatgagtttgactttgaacattatg 753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 cacagagtatcagggagcctccagcaaaccccaatgatgagtttgactttgaacattatg 247
Query: 754 accaagaagattcgagtaaccctgtaggtatagggactatagcaactctacctaacttag 813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 accaagaagattcgagtaaccctgtaggtatagggactatagcaactctacctaacttag 307
Query: 814 gtgatctcagtgaaaacatacaaatcagaacagaaggtccagatagtgatgaagaagatg 873
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gtgatctcagtgaaaacatacaaatcagaacagaaggtccagatagtgatgaagaagatg 367
Query: 874 acatcattaagccagatgacaacttattacttgtaggacatgttgaaacagatgccagtg 933
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 acatcattaagccagatgacaacttattacttgtaggacatgttgaaacagatgccagtg 427
Query: 934 tcttagaagtttatattttcaacaaagaagagggatcattctacgtccatcatgacataa 993
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 428 tcttagaagtttatattttcaacaaagaagagggatcattgtacgtccatcatgacataa 487
Query: 994 tactgccctggtttccgctgtgtatagagtggctcaatcatgacccctcagatccacaac 1053
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 tactgccctggtttccgctgtgtatagagtggctcaatcatgacccctcagatccacaac 547
Query: 1054 caggcaatctttgcgctctcggtggcatggacccagtgatacaagtgtgggatttggata 1113
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 548 caggcaatctttgcgctctcggtggcatggacccagtgatacaagtgtgggatttggaca 607
Query: 1114 ttgaaaactgtttggaaccggctttcaagctcggcaggaaaccaaataagaagaaaaaga 1173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 ttgaaaactgtttggaaccggctttcaagctcggcaggaaaccaaataagaagaaaaaga 667
Query: 1174 caaaaagaattggtcacaaggatgctgttctggatctgtcttggaacacgaacttttctc 1233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 caaaaagaattggtcacaaggatgctgttctggatctgtcttggaacacgaacttttctc 727
Query: 1234 acgtcttag 1242
|||||||||
Sbjct: 728 acgtcttag 736
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 394,334
Number of extensions: 12106
Number of successful extensions: 12106
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 12106
Number of HSP's successfully gapped: 1
Length of query: 2386
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2369
Effective length of database: 8,119,229
Effective search space: 19234453501
Effective search space used: 19234453501
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)