BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10831 (UTR included)
(1962 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1937_C1 1104 0.0
>BF14_1937_C1
Length = 710
Score = 1104 bits (557), Expect = 0.0
Identities = 557/557 (100%)
Strand = Plus / Plus
Query: 494 aggtcgtatgcaccactcggcgagcacgccggcgggcgtggacggaggcgcccgcacgcc 553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 aggtcgtatgcaccactcggcgagcacgccggcgggcgtggacggaggcgcccgcacgcc 213
Query: 554 gcccgccacgcccaagaagggtggcaagatgctcgccgtgcgagtgcagatgttggacga 613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 gcccgccacgcccaagaagggtggcaagatgctcgccgtgcgagtgcagatgttggacga 273
Query: 614 ctccatatcaatgttccagatacagtcaaaggcacacggtaaagttctgttcgatcaagt 673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 ctccatatcaatgttccagatacagtcaaaggcacacggtaaagttctgttcgatcaagt 333
Query: 674 ctgcaggcaacttcatttgttggaggctgattacttcgggcttgaatatcaagatgctaa 733
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 ctgcaggcaacttcatttgttggaggctgattacttcgggcttgaatatcaagatgctaa 393
Query: 734 cgggataaagtactggctggatgtggagaagccgatgtgccgtcaggtcggcctgtcgat 793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 cgggataaagtactggctggatgtggagaagccgatgtgccgtcaggtcggcctgtcgat 453
Query: 794 gctggagccgaccctccgcttctgcgtcaagttctacaccccagacccggcgcggctcga 853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 gctggagccgaccctccgcttctgcgtcaagttctacaccccagacccggcgcggctcga 513
Query: 854 ggaggagttcaccagatacctgttctgtctccaagtgaaacgtgacctgatgctggggtg 913
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 ggaggagttcaccagatacctgttctgtctccaagtgaaacgtgacctgatgctggggtg 573
Query: 914 catacagtgtaacgagaacaccgccgcgctcatggccagttacatagtacaagcggagtg 973
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 catacagtgtaacgagaacaccgccgcgctcatggccagttacatagtacaagcggagtg 633
Query: 974 cggagattttgtcccggaagactaccctgaccacacgtacctcagcgggtacaagttctt 1033
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 cggagattttgtcccggaagactaccctgaccacacgtacctcagcgggtacaagttctt 693
Query: 1034 ccccggacaggacgcag 1050
|||||||||||||||||
Sbjct: 694 ccccggacaggacgcag 710
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 207,419
Number of extensions: 3624
Number of successful extensions: 3624
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3624
Number of HSP's successfully gapped: 1
Length of query: 1962
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1945
Effective length of database: 8,119,229
Effective search space: 15791900405
Effective search space used: 15791900405
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)