BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10840 (UTR included)
(3268 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01015A2G10 1358 0.0
BF01054B2D02 950 0.0
BF14_271_C1 478 e-134
>BF01015A2G10
Length = 737
Score = 1358 bits (685), Expect = 0.0
Identities = 713/722 (98%), Gaps = 1/722 (0%)
Strand = Plus / Plus
Query: 2274 agatcggttgcgacaggcttgcctggaattgactttagcgctgattctagacgacatagt 2333
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 8 agatcggttgcgacaggcttgccnnnaattgactttagcgctgattctagacgacatagt 67
Query: 2334 ctaaggggctctataacacgagcgttgggtgttctcaagccgaagcacgatagaccatca 2393
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 68 ctaaggggctctataacacgagcgttgggtgttctcacgccgaagcacgatagaccatca 127
Query: 2394 ccatctagttcaagcgagagttctagcgtgatgagtctgacacaaccgtacatatcttat 2453
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ccatccagttcaagcgagagttctagcgtgatgagtctgacacaaccgtacatatcttat 187
Query: 2454 tcacctcctatagcagtgcggacgctgtctcaattgagcatgacatacgctccaccaccg 2513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 tcacctcctatagcagtgcggacgctgtctcaattgagcatgacatacgctccaccaccg 247
Query: 2514 acactggcagagtatgaaccgatatatacgcctttgagtttatattcccagtctagcgta 2573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 acactggcagagtatgaaccgatatatacgcctttgagtttatattcccagtctagcgta 307
Query: 2574 tccacaaaggatagccttcagcgccttaatgatggcaaagattataatatcacccacagg 2633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 tccacaaaggatagccttcagcgccttaatgatggcaaagattataatatcacccacagg 367
Query: 2634 tacggacaaaaagtagatcaatctcatcgagtcagttcaccgttacctgaaacatctgac 2693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 tacggacaaaaagtagatcaatctcatcgagtcagttcaccgttacctgaaacatctgac 427
Query: 2694 ggaaataagcaaagacgtcacagacgagtgaaaagtataggagatattaatgcttcgagc 2753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 ggaaataagcaaagacgtcacagacgagtgaaaagtataggagatattaatgcttcgagc 487
Query: 2754 aaaacgacggtttaaaccgaggaaaaaatatataatagtaagctacaaatgcttctttat 2813
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aaaacgatggtttaaaccgaggaaaaaatatataatagtaagctacaaatgcttctttat 547
Query: 2814 tataaggatttaggaagatttccatcatcaagggggatttttcgtgtattttagagtaaa 2873
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 548 tataaggatttaggaagatttccataatcaagggggatttttcgtgtattttagagtaaa 607
Query: 2874 tcgttt-aaaaaattaggcaataatagaggattggcattatactcgataaatattttaaa 2932
|||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 608 tcgtttaaaaaaattaggcaataatagaggattggcattttactcgataaatattttaaa 667
Query: 2933 atttaatagtcatagtcatcgtgcaaagtatatgctatgtgtatccgaatcttaaaaaaa 2992
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 atttaatagtcatagtcatcgtgcaaagtatatgctatgtgtatccgaatcttaaaaaaa 727
Query: 2993 tg 2994
||
Sbjct: 728 tg 729
>BF01054B2D02
Length = 774
Score = 950 bits (479), Expect = 0.0
Identities = 491/495 (99%)
Strand = Plus / Plus
Query: 1734 agcatcggacagctgagtcatgcatgggttgcggcggagtggttgccagatctagggcta 1793
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1 agcatcggacagctgagtcatgcatgggttgctgcggagtggttgccagatctagggcta 60
Query: 1794 tcccagtacgcagaatcatttttagccaatttggtggatgctagaatgctggatactatc 1853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcccagtacgcagaatcatttttagccaatttggtggatgctagaatgctggatactatc 120
Query: 1854 agcaagaaggagctggagaaatatcttggtgttacgagaaagttccatcaggcatccatt 1913
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agcaagaaagagctggagaaatatcttggtgttacgagaaagttccatcaggcatccatt 180
Query: 1914 gtccacggcattcatttgctacgaatcatgaaatatgatagacaagcactggcagtacgg 1973
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gttcacggcattcatttgctacgaatcatgaaatatgatagacaagcactggcagtacgg 240
Query: 1974 cggcatcagtgcgaaaatgtcgatgcggaccctctggtttggaccaatcaaaggtttatg 2033
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cggcatcagtgcgaaaatgtcgatgcggaccctctggtttggaccaatcaaaggtttatg 300
Query: 2034 cgttggtctcacaatatcgacttgggtgaatttgctgagaatcttaaagacagcggtgtc 2093
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 301 cgttggtctcacaatatcgacttgggtgaatttgctgagaatcttaaagatagcggtgtc 360
Query: 2094 catggtggtttggtggtactggaaccatcattcactggtgagaccatggccacggcgctt 2153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 catggtggtttggtggtactggaaccatcattcactggtgagaccatggccacggcgctt 420
Query: 2154 ggtataccaccgtcgaagagtataattcgaaggcatttggtagctgaatttgatgccctt 2213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggtataccaccgtcgaagagtataattcgaaggcatttggtagctgaatttgatgccctt 480
Query: 2214 gtcatcccagcgagg 2228
|||||||||||||||
Sbjct: 481 gtcatcccagcgagg 495
>BF14_271_C1
Length = 1373
Score = 478 bits (241), Expect = e-134
Identities = 244/245 (99%)
Strand = Plus / Plus
Query: 535 ctctaaaagccgacaagaaacggctcaaagcggagaaatttgatttgctgaatcaaatga 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1129 ctctaaaagccgacaagaaacggctcaaagcggagaaatttgatttgctgaatcaaatga 1188
Query: 595 agcaactctacgccactcttgaggacaaagagaaggagcttagggatttcatcaggaatt 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1189 agcaactctacgccactcttgaggacaaagagaaggagcttagggatttcatcaggaatt 1248
Query: 655 atgaacagatgcggtctcgaagcggtgcgtcctcagcgctgggtgcagaacgagctgaac 714
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1249 atgaacagatgcggtctcgaagcggtgcgtcctcagcgctgggtgcagaaagagctgaac 1308
Query: 715 gcgaacgcgagcgtgcggcattgttgcggcatgcccgcgacgaggccgagcgctctttac 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1309 gcgaacgcgagcgtgcggcattgttgcggcatgcccgcgacgaggccgagcgctctttac 1368
Query: 775 aactg 779
|||||
Sbjct: 1369 aactg 1373
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 327,432
Number of extensions: 8197
Number of successful extensions: 8197
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 8196
Number of HSP's successfully gapped: 3
Length of query: 3268
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3250
Effective length of database: 8,109,745
Effective search space: 26356671250
Effective search space used: 26356671250
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)